Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn2B2RVW2 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Clrn2B2RVW2 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn2B2RVW2 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn2B2RVW2 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clrn2B2RVW2 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clrn2B2RVW2 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.52□□□□□ -0.4
Clrn2B2RVW2 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clrn2B2RVW2 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Clrn2B2RVW2 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clrn2B2RVW2 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clrn2B2RVW2 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clrn2B2RVW2 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clrn2B2RVW2 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.52□□□□□ -0.4
Clrn2B2RVW2 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Clrn2B2RVW2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clrn2B2RVW2 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Gm11544-201ENSMUST00000120215 382 ntBASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Gm25591-201ENSMUST00000177317 94 ntBASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Gm38038-201ENSMUST00000193803 259 ntBASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Gm5040-201ENSMUST00000218609 800 ntBASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Gm29689-201ENSMUST00000221076 589 ntBASIC12.52□□□□□ -0.41
Clrn2B2RVW2 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 AC161172.1-201ENSMUST00000227801 486 ntBASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn2B2RVW2 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Gm13700-201ENSMUST00000118624 1128 ntBASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Gm14997-201ENSMUST00000119232 636 ntBASIC12.51□□□□□ -0.41
Clrn2B2RVW2 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Gm7805-201ENSMUST00000154348 448 ntBASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Gm5738-201ENSMUST00000206016 779 ntBASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.51□□□□□ -0.41
Clrn2B2RVW2 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn2B2RVW2 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms