Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clp1Q99LI9 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.52□□□□□ -0.56
Clp1Q99LI9 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.52□□□□□ -0.56
Clp1Q99LI9 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Clp1Q99LI9 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Clp1Q99LI9 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Clp1Q99LI9 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Clp1Q99LI9 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Clp1Q99LI9 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Clp1Q99LI9 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Clp1Q99LI9 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Clp1Q99LI9 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clp1Q99LI9 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clp1Q99LI9 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clp1Q99LI9 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clp1Q99LI9 Gm14639-201ENSMUST00000120850 866 ntBASIC11.52□□□□□ -0.57
Clp1Q99LI9 Gm14148-201ENSMUST00000122433 1008 ntBASIC11.52□□□□□ -0.57
Clp1Q99LI9 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clp1Q99LI9 Gm24346-201ENSMUST00000158712 194 ntBASIC11.52□□□□□ -0.57
Clp1Q99LI9 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clp1Q99LI9 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clp1Q99LI9 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Clp1Q99LI9 Gm38313-201ENSMUST00000191953 1266 ntBASIC11.52□□□□□ -0.57
Clp1Q99LI9 Gm37860-201ENSMUST00000195380 1034 ntBASIC11.52□□□□□ -0.57
Clp1Q99LI9 Gm43117-201ENSMUST00000198531 379 ntBASIC11.52□□□□□ -0.57
Clp1Q99LI9 Gm43124-201ENSMUST00000201878 278 ntBASIC11.52□□□□□ -0.57
Clp1Q99LI9 Gm44540-201ENSMUST00000205640 354 ntBASIC11.52□□□□□ -0.57
Clp1Q99LI9 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC11.52□□□□□ -0.57
Clp1Q99LI9 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clp1Q99LI9 Gm45733-201ENSMUST00000212988 437 ntBASIC11.52□□□□□ -0.57
Clp1Q99LI9 Gm18164-201ENSMUST00000213769 927 ntBASIC11.52□□□□□ -0.57
Clp1Q99LI9 Gm18166-201ENSMUST00000215557 927 ntBASIC11.52□□□□□ -0.57
Clp1Q99LI9 Gm5040-201ENSMUST00000218609 800 ntBASIC11.52□□□□□ -0.57
Clp1Q99LI9 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC11.52□□□□□ -0.57
Clp1Q99LI9 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clp1Q99LI9 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Clp1Q99LI9 Gm8730-201ENSMUST00000076373 954 ntBASIC11.52□□□□□ -0.57
Clp1Q99LI9 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clp1Q99LI9 Gm9701-201ENSMUST00000077976 427 ntBASIC11.52□□□□□ -0.57
Clp1Q99LI9 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clp1Q99LI9 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.52□□□□□ -0.57
Clp1Q99LI9 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clp1Q99LI9 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clp1Q99LI9 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clp1Q99LI9 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.52□□□□□ -0.57
Clp1Q99LI9 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Clp1Q99LI9 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clp1Q99LI9 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.52□□□□□ -0.57
Clp1Q99LI9 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.52□□□□□ -0.57
Clp1Q99LI9 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clp1Q99LI9 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.52□□□□□ -0.57
Clp1Q99LI9 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Gm38111-201ENSMUST00000194817 2741 ntBASIC11.51□□□□□ -0.57
Clp1Q99LI9 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Pck2-205ENSMUST00000226352 2784 ntBASIC11.51□□□□□ -0.57
Clp1Q99LI9 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Gm13192-201ENSMUST00000101199 208 ntBASIC11.51□□□□□ -0.57
Clp1Q99LI9 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Gm10443-201ENSMUST00000119024 210 ntBASIC11.51□□□□□ -0.57
Clp1Q99LI9 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC11.51□□□□□ -0.57
Clp1Q99LI9 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Gm12950-201ENSMUST00000121683 417 ntBASIC11.51□□□□□ -0.57
Clp1Q99LI9 Gm6939-201ENSMUST00000122029 864 ntBASIC11.51□□□□□ -0.57
Clp1Q99LI9 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Gm26875-201ENSMUST00000181006 950 ntBASIC11.51□□□□□ -0.57
Clp1Q99LI9 Gm7833-201ENSMUST00000183288 990 ntBASIC11.51□□□□□ -0.57
Clp1Q99LI9 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Gm37944-201ENSMUST00000194233 414 ntBASIC11.51□□□□□ -0.57
Clp1Q99LI9 Gm38217-201ENSMUST00000194358 910 ntBASIC11.51□□□□□ -0.57
Clp1Q99LI9 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Gm20568-201ENSMUST00000197129 208 ntBASIC11.51□□□□□ -0.57
Clp1Q99LI9 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 AC132384.2-201ENSMUST00000218018 526 ntBASIC11.51□□□□□ -0.57
Clp1Q99LI9 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.51□□□□□ -0.57
Clp1Q99LI9 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.51□□□□□ -0.57
Clp1Q99LI9 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clp1Q99LI9 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms