Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm12136-201ENSMUST00000120460 1209 ntBASIC10.23□□□□□ -0.77
Clrn1Q8K445 Gm12176-201ENSMUST00000121420 875 ntBASIC10.23□□□□□ -0.77
Clrn1Q8K445 Mir1893-201ENSMUST00000122565 83 ntBASIC10.23□□□□□ -0.77
Clrn1Q8K445 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Gm42660-201ENSMUST00000197733 947 ntBASIC10.23□□□□□ -0.77
Clrn1Q8K445 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 AC099645.1-201ENSMUST00000226476 1105 ntBASIC10.23□□□□□ -0.77
Clrn1Q8K445 BX649293.1-201ENSMUST00000227437 631 ntBASIC10.23□□□□□ -0.77
Clrn1Q8K445 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Clrn1Q8K445 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.22□□□□□ -0.77
Clrn1Q8K445 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Gm13615-201ENSMUST00000120242 1612 ntBASIC10.22□□□□□ -0.77
Clrn1Q8K445 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.22□□□□□ -0.77
Clrn1Q8K445 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Gm12570-201ENSMUST00000122047 1030 ntBASIC10.22□□□□□ -0.77
Clrn1Q8K445 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Gm37638-201ENSMUST00000194337 1123 ntBASIC10.22□□□□□ -0.77
Clrn1Q8K445 Gm43275-201ENSMUST00000202053 1020 ntBASIC10.22□□□□□ -0.77
Clrn1Q8K445 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Gm44551-201ENSMUST00000208804 171 ntBASIC10.22□□□□□ -0.77
Clrn1Q8K445 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC10.22□□□□□ -0.77
Clrn1Q8K445 AC166341.2-201ENSMUST00000220571 120 ntBASIC10.22□□□□□ -0.77
Clrn1Q8K445 CT030166.5-201ENSMUST00000222249 420 ntBASIC10.22□□□□□ -0.77
Clrn1Q8K445 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Gm7405-201ENSMUST00000121476 1337 ntBASIC10.22□□□□□ -0.77
Clrn1Q8K445 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms