Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC12.81□□□□□ -0.36
Cchcr1Q8K2I2 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Gm13104-201ENSMUST00000119651 1446 ntBASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Gm16518-201ENSMUST00000117960 508 ntBASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Gm13611-201ENSMUST00000118269 318 ntBASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Gm11246-201ENSMUST00000120880 345 ntBASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Gm3828-201ENSMUST00000121817 257 ntBASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Gm6677-201ENSMUST00000195100 441 ntBASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 AC137950.2-201ENSMUST00000227127 1089 ntBASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Gm44826-201ENSMUST00000207648 2332 ntBASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cchcr1Q8K2I2 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Gm21142-201ENSMUST00000179999 2604 ntBASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Gm11331-201ENSMUST00000119764 288 ntBASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Gm19927-201ENSMUST00000185792 781 ntBASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Gm8162-201ENSMUST00000213951 665 ntBASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Gm43052-201ENSMUST00000201451 1628 ntBASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Gm45124-201ENSMUST00000206723 2755 ntBASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cchcr1Q8K2I2 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Cchcr1Q8K2I2 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms