Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Gm27341-201ENSMUST00000183570 106 ntBASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Platr10-202ENSMUST00000191479 818 ntBASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Gm31941-201ENSMUST00000209689 350 ntBASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Ginm1-202ENSMUST00000065124 300 ntBASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Gm38910-201ENSMUST00000204630 2448 ntBASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9.15□□□□□ -0.95
Nhlrc3Q8CCH2 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Nhlrc3Q8CCH2 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Nhlrc3Q8CCH2 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Nhlrc3Q8CCH2 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Nhlrc3Q8CCH2 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.15□□□□□ -0.95
Nhlrc3Q8CCH2 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 AC122367.1-201ENSMUST00000221978 1709 ntBASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Fcamr-201ENSMUST00000027670 1743 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Prkag2-201ENSMUST00000030784 3331 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Gm9415-201ENSMUST00000200462 1321 ntBASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Gfra2-203ENSMUST00000227697 1323 ntBASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Tex21-202ENSMUST00000218426 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Gm2383-201ENSMUST00000181461 807 ntBASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Ighv5-11-201ENSMUST00000193354 371 ntBASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Gm44315-201ENSMUST00000203041 219 ntBASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 AC122408.1-201ENSMUST00000218949 218 ntBASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 AC154290.1-201ENSMUST00000223786 1240 ntBASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Gm5451-201ENSMUST00000080545 579 ntBASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Rorc-201ENSMUST00000029795 2136 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Gm42460-201ENSMUST00000198863 2567 ntBASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Nhlrc3Q8CCH2 Bcl2-202ENSMUST00000189999 2841 ntBASIC9.13□□□□□ -0.95
Nhlrc3Q8CCH2 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Nhlrc3Q8CCH2 Gm6170-201ENSMUST00000187672 1388 ntBASIC9.13□□□□□ -0.95
Nhlrc3Q8CCH2 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms