Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Gm22144-201ENSMUST00000157402 102 ntBASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Gm12407-201ENSMUST00000180219 324 ntBASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Gm5051-201ENSMUST00000204085 485 ntBASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Gm45770-201ENSMUST00000212105 616 ntBASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Rims2-204ENSMUST00000226410 3685 ntBASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Gm10417-201ENSMUST00000194341 3522 ntBASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ctdp1Q7TSG2 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Gm6768-201ENSMUST00000022467 1878 ntBASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Gm23045-201ENSMUST00000175041 96 ntBASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Gm7741-201ENSMUST00000181445 989 ntBASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Gm43852-201ENSMUST00000202098 917 ntBASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.79□□□□□ -0.52
Ctdp1Q7TSG2 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Gm43274-201ENSMUST00000202545 5000 ntBASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Gm22711-201ENSMUST00000116890 133 ntBASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Gm12218-201ENSMUST00000117666 399 ntBASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Gm6714-201ENSMUST00000218677 2330 ntBASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ctdp1Q7TSG2 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms