Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.85□□□□□ -0.83
VcanQ62059 Prpf39-201ENSMUST00000120580 4069 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
VcanQ62059 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC9.85□□□□□ -0.83
VcanQ62059 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VcanQ62059 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
VcanQ62059 Gm7823-201ENSMUST00000120761 1623 ntBASIC9.85□□□□□ -0.83
VcanQ62059 Sap130-202ENSMUST00000178164 4030 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
VcanQ62059 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VcanQ62059 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC9.85□□□□□ -0.83
VcanQ62059 Pla2g2d-201ENSMUST00000030528 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VcanQ62059 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
VcanQ62059 Ssr3-202ENSMUST00000119896 1469 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
VcanQ62059 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VcanQ62059 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VcanQ62059 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
VcanQ62059 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VcanQ62059 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VcanQ62059 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Ighv1-67-201ENSMUST00000103538 294 ntBASIC9.84□□□□□ -0.83
VcanQ62059 Gm8606-201ENSMUST00000121482 888 ntBASIC9.84□□□□□ -0.83
VcanQ62059 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Gm14225-201ENSMUST00000142310 539 ntTSL 2 BASIC9.84□□□□□ -0.83
VcanQ62059 Gm14437-201ENSMUST00000152284 360 ntTSL 5 BASIC9.84□□□□□ -0.83
VcanQ62059 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
VcanQ62059 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
VcanQ62059 Gm17828-201ENSMUST00000183380 799 ntBASIC9.84□□□□□ -0.83
VcanQ62059 Gm46329-201ENSMUST00000218373 609 ntTSL 5 BASIC9.84□□□□□ -0.83
VcanQ62059 Platr25-206ENSMUST00000222303 1171 ntTSL 5 BASIC9.84□□□□□ -0.83
VcanQ62059 AC124687.4-201ENSMUST00000222361 463 ntTSL 5 BASIC9.84□□□□□ -0.83
VcanQ62059 Htr1b-201ENSMUST00000051005 1273 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
VcanQ62059 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 1700010N08Rik-202ENSMUST00000188166 1323 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Plekha5-206ENSMUST00000203774 1912 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
VcanQ62059 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
VcanQ62059 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC9.84□□□□□ -0.83
VcanQ62059 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.84□□□□□ -0.83
VcanQ62059 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
VcanQ62059 Cox6c-201ENSMUST00000014457 503 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Gm15841-201ENSMUST00000160540 517 ntTSL 3 BASIC9.84□□□□□ -0.83
VcanQ62059 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC9.84□□□□□ -0.83
VcanQ62059 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Gm43340-201ENSMUST00000200448 1344 ntBASIC9.84□□□□□ -0.83
VcanQ62059 Gm38058-201ENSMUST00000194323 4368 ntBASIC9.84□□□□□ -0.83
VcanQ62059 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
VcanQ62059 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
VcanQ62059 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
VcanQ62059 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Mettl18-201ENSMUST00000045694 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
VcanQ62059 Cyp2c44-201ENSMUST00000026211 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Mrps18b-202ENSMUST00000113782 803 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Gm12746-201ENSMUST00000151369 615 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Gm8696-201ENSMUST00000174777 385 ntBASIC9.84□□□□□ -0.83
VcanQ62059 Mir6922-201ENSMUST00000185099 66 ntBASIC9.84□□□□□ -0.83
VcanQ62059 Il24-202ENSMUST00000187650 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Gm7384-201ENSMUST00000203682 530 ntBASIC9.84□□□□□ -0.83
VcanQ62059 AC165260.2-202ENSMUST00000224998 631 ntBASIC9.84□□□□□ -0.83
VcanQ62059 Gm26397-201ENSMUST00000083703 134 ntBASIC9.84□□□□□ -0.83
VcanQ62059 Gm37264-201ENSMUST00000194916 2192 ntBASIC9.84□□□□□ -0.83
VcanQ62059 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.84□□□□□ -0.83
VcanQ62059 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VcanQ62059 Rnf13-201ENSMUST00000041826 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.84
VcanQ62059 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
VcanQ62059 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
VcanQ62059 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC9.83□□□□□ -0.84
VcanQ62059 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Platr11-201ENSMUST00000182885 388 ntTSL 3 BASIC9.83□□□□□ -0.84
VcanQ62059 Gm43787-201ENSMUST00000197792 1037 ntBASIC9.83□□□□□ -0.84
VcanQ62059 AC154264.2-201ENSMUST00000216569 403 ntTSL 5 BASIC9.83□□□□□ -0.84
VcanQ62059 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
VcanQ62059 Slc25a14-202ENSMUST00000114936 1582 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
VcanQ62059 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Rorb-202ENSMUST00000112828 2854 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms