Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx49Q4FZF3 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.73□□□□□ -0.37
Ddx49Q4FZF3 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC12.73□□□□□ -0.37
Ddx49Q4FZF3 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC12.73□□□□□ -0.37
Ddx49Q4FZF3 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC12.73□□□□□ -0.37
Ddx49Q4FZF3 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ddx49Q4FZF3 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx49Q4FZF3 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx49Q4FZF3 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx49Q4FZF3 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx49Q4FZF3 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx49Q4FZF3 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ddx49Q4FZF3 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx49Q4FZF3 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx49Q4FZF3 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ddx49Q4FZF3 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx49Q4FZF3 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.73□□□□□ -0.37
Ddx49Q4FZF3 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ddx49Q4FZF3 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ddx49Q4FZF3 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ddx49Q4FZF3 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Erich3-203ENSMUST00000189969 3460 ntBASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Gm26875-201ENSMUST00000181006 950 ntBASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Gm28671-201ENSMUST00000187036 692 ntBASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Gm8226-201ENSMUST00000190511 798 ntBASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Gm36982-201ENSMUST00000193796 1128 ntBASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Gm43726-201ENSMUST00000199110 775 ntBASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Gm43866-201ENSMUST00000203894 839 ntBASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Gm9644-201ENSMUST00000212828 1183 ntBASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 AC241616.1-201ENSMUST00000213741 166 ntBASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 AC154477.1-201ENSMUST00000226515 773 ntBASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 AC137842.2-201ENSMUST00000227734 797 ntBASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Gm5278-201ENSMUST00000055957 552 ntBASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.72□□□□□ -0.37
Ddx49Q4FZF3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 Gm26174-201ENSMUST00000158415 219 ntBASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 Gm5976-201ENSMUST00000180794 996 ntBASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 Gm37688-201ENSMUST00000195195 465 ntBASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx49Q4FZF3 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx49Q4FZF3 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC12.71□□□□□ -0.38
Ddx49Q4FZF3 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.71□□□□□ -0.38
Ddx49Q4FZF3 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx49Q4FZF3 AC090962.2-201ENSMUST00000225064 1801 ntBASIC12.71□□□□□ -0.38
Ddx49Q4FZF3 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx49Q4FZF3 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ddx49Q4FZF3 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx49Q4FZF3 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx49Q4FZF3 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx49Q4FZF3 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.71□□□□□ -0.38
Ddx49Q4FZF3 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx49Q4FZF3 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 140.7 ms