Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col19a1Q0VF58 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col19a1Q0VF58 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Col19a1Q0VF58 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Gm13169-201ENSMUST00000122090 1459 ntBASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Gm15661-201ENSMUST00000117390 556 ntBASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Gm8661-201ENSMUST00000118688 992 ntBASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Gm12362-201ENSMUST00000121986 342 ntBASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Gm16560-201ENSMUST00000159115 404 ntBASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Gm5244-201ENSMUST00000164001 339 ntBASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Gm22876-201ENSMUST00000175450 298 ntBASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.58□□□□□ -0.56
Col19a1Q0VF58 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Gm9771-201ENSMUST00000198267 1137 ntBASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Gm43002-201ENSMUST00000200310 155 ntBASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Gm43851-201ENSMUST00000200726 327 ntTSL 3 BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 CR974487.1-201ENSMUST00000220984 413 ntBASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Col19a1Q0VF58 Gm11231-201ENSMUST00000117895 1706 ntBASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 H2-DMb2-202ENSMUST00000171231 1483 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Gm7001-201ENSMUST00000219384 1465 ntBASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Gm9864-201ENSMUST00000090043 1656 ntBASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 6330418K02Rik-202ENSMUST00000125662 1267 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Gm23899-201ENSMUST00000158112 90 ntBASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Gm5801-201ENSMUST00000182247 780 ntBASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Gm43965-201ENSMUST00000203779 789 ntBASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 AC156274.1-201ENSMUST00000219193 634 ntBASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Gm18749-201ENSMUST00000222410 692 ntBASIC11.57□□□□□ -0.56
Col19a1Q0VF58 CT025642.1-201ENSMUST00000224734 1219 ntBASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Olfr403-201ENSMUST00000076675 942 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Olfr43-201ENSMUST00000078936 1092 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col19a1Q0VF58 Gm9519-201ENSMUST00000206108 1337 ntBASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms