Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Gm9701-201ENSMUST00000077976 427 ntBASIC13.62□□□□□ -0.23
Nkx2-3P97334 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-3P97334 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Gm28624-201ENSMUST00000186430 2131 ntBASIC13.61□□□□□ -0.23
Nkx2-3P97334 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Gm10537-201ENSMUST00000192625 1698 ntBASIC13.61□□□□□ -0.23
Nkx2-3P97334 Gm6517-201ENSMUST00000121056 511 ntBASIC13.61□□□□□ -0.23
Nkx2-3P97334 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Gm29157-201ENSMUST00000188753 612 ntBASIC13.61□□□□□ -0.23
Nkx2-3P97334 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Gm28745-201ENSMUST00000190069 305 ntBASIC13.61□□□□□ -0.23
Nkx2-3P97334 Gm37141-201ENSMUST00000191938 422 ntBASIC13.61□□□□□ -0.23
Nkx2-3P97334 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Gm19566-201ENSMUST00000199576 610 ntBASIC13.61□□□□□ -0.23
Nkx2-3P97334 Gm45363-201ENSMUST00000210196 1294 ntBASIC13.61□□□□□ -0.23
Nkx2-3P97334 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC13.61□□□□□ -0.23
Nkx2-3P97334 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-3P97334 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Gm14231-201ENSMUST00000120090 592 ntBASIC13.6□□□□□ -0.23
Nkx2-3P97334 Gm15373-201ENSMUST00000121495 214 ntBASIC13.6□□□□□ -0.23
Nkx2-3P97334 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Gm29245-201ENSMUST00000187332 1416 ntBASIC13.6□□□□□ -0.23
Nkx2-3P97334 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-3P97334 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nkx2-3P97334 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-3P97334 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC13.6□□□□□ -0.23
Nkx2-3P97334 AC133496.1-201ENSMUST00000223891 743 ntBASIC13.6□□□□□ -0.23
Nkx2-3P97334 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nkx2-3P97334 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
Nkx2-3P97334 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-3P97334 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-3P97334 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Nkx2-3P97334 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Nkx2-3P97334 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-3P97334 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-3P97334 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-3P97334 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-3P97334 Gm13120-201ENSMUST00000117343 1446 ntBASIC13.59□□□□□ -0.23
Nkx2-3P97334 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms