Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd9P40240 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cd9P40240 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd9P40240 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd9P40240 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC10.7□□□□□ -0.7
Cd9P40240 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC10.7□□□□□ -0.7
Cd9P40240 Gm5523-201ENSMUST00000180415 997 ntBASIC10.7□□□□□ -0.7
Cd9P40240 Gm9081-201ENSMUST00000182346 991 ntBASIC10.7□□□□□ -0.7
Cd9P40240 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd9P40240 Gm5100-201ENSMUST00000195631 589 ntBASIC10.7□□□□□ -0.7
Cd9P40240 Gm44304-201ENSMUST00000200509 145 ntBASIC10.7□□□□□ -0.7
Cd9P40240 Gm3726-201ENSMUST00000203110 785 ntBASIC10.7□□□□□ -0.7
Cd9P40240 Gm7319-201ENSMUST00000210047 778 ntBASIC10.7□□□□□ -0.7
Cd9P40240 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
Cd9P40240 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd9P40240 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd9P40240 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd9P40240 Mirlet7i-201ENSMUST00000083472 85 ntBASIC10.7□□□□□ -0.7
Cd9P40240 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd9P40240 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Cd9P40240 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cd9P40240 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Cd9P40240 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd9P40240 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cd9P40240 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.7□□□□□ -0.7
Cd9P40240 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd9P40240 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cd9P40240 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd9P40240 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd9P40240 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd9P40240 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cd9P40240 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd9P40240 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.7□□□□□ -0.7
Cd9P40240 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd9P40240 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cd9P40240 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cd9P40240 AC122367.1-201ENSMUST00000221978 1709 ntBASIC10.7□□□□□ -0.7
Cd9P40240 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Cd9P40240 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC10.69□□□□□ -0.7
Cd9P40240 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Cd9P40240 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Gm6322-201ENSMUST00000118789 1004 ntBASIC10.69□□□□□ -0.7
Cd9P40240 Mir1901-201ENSMUST00000122616 78 ntBASIC10.69□□□□□ -0.7
Cd9P40240 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Cd9P40240 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Cd9P40240 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Cd9P40240 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Gm37638-201ENSMUST00000194337 1123 ntBASIC10.69□□□□□ -0.7
Cd9P40240 Gm42518-201ENSMUST00000196277 938 ntBASIC10.69□□□□□ -0.7
Cd9P40240 Gm3017-201ENSMUST00000203603 1126 ntBASIC10.69□□□□□ -0.7
Cd9P40240 Gm10109-202ENSMUST00000206890 1211 ntBASIC10.69□□□□□ -0.7
Cd9P40240 AC154431.1-201ENSMUST00000224910 880 ntBASIC10.69□□□□□ -0.7
Cd9P40240 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Cd9P40240 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.69□□□□□ -0.7
Cd9P40240 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Gm8320-201ENSMUST00000177584 1762 ntBASIC10.69□□□□□ -0.7
Cd9P40240 Gm8303-201ENSMUST00000178371 1762 ntBASIC10.69□□□□□ -0.7
Cd9P40240 Gm8331-201ENSMUST00000178433 1762 ntBASIC10.69□□□□□ -0.7
Cd9P40240 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Cd9P40240 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd9P40240 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Cd9P40240 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Cd9P40240 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Cd9P40240 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.68□□□□□ -0.7
Cd9P40240 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Cd9P40240 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Gm11667-201ENSMUST00000119828 486 ntBASIC10.68□□□□□ -0.7
Cd9P40240 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Gm4879-201ENSMUST00000122190 1272 ntBASIC10.68□□□□□ -0.7
Cd9P40240 Mir1905-201ENSMUST00000122779 82 ntBASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms