Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.04□□□□□ -0.64
Hmga1P17095 AC164883.7-201ENSMUST00000228534 851 ntBASIC11.04□□□□□ -0.64
Hmga1P17095 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmga1P17095 Mir194-2-201ENSMUST00000083648 86 ntBASIC11.04□□□□□ -0.64
Hmga1P17095 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.04□□□□□ -0.64
Hmga1P17095 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmga1P17095 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hmga1P17095 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmga1P17095 Gm13169-201ENSMUST00000122090 1459 ntBASIC11.04□□□□□ -0.64
Hmga1P17095 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmga1P17095 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmga1P17095 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Hmga1P17095 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hmga1P17095 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hmga1P17095 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Hmga1P17095 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hmga1P17095 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmga1P17095 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmga1P17095 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Hmga1P17095 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmga1P17095 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Hmga1P17095 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Hmga1P17095 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Hmga1P17095 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmga1P17095 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Hmga1P17095 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmga1P17095 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmga1P17095 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmga1P17095 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmga1P17095 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC11.03□□□□□ -0.64
Hmga1P17095 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmga1P17095 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.03□□□□□ -0.64
Hmga1P17095 Gm43052-201ENSMUST00000201451 1628 ntBASIC11.03□□□□□ -0.64
Hmga1P17095 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Hmga1P17095 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmga1P17095 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmga1P17095 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmga1P17095 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Hmga1P17095 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmga1P17095 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC11.03□□□□□ -0.64
Hmga1P17095 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC11.03□□□□□ -0.64
Hmga1P17095 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC11.03□□□□□ -0.64
Hmga1P17095 Gm8019-201ENSMUST00000119317 587 ntBASIC11.03□□□□□ -0.64
Hmga1P17095 Gm13204-201ENSMUST00000120110 821 ntBASIC11.03□□□□□ -0.64
Hmga1P17095 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC11.03□□□□□ -0.64
Hmga1P17095 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC11.03□□□□□ -0.64
Hmga1P17095 Cd9-ps-201ENSMUST00000174687 650 ntBASIC11.03□□□□□ -0.64
Hmga1P17095 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC11.03□□□□□ -0.64
Hmga1P17095 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC11.03□□□□□ -0.64
Hmga1P17095 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmga1P17095 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC11.03□□□□□ -0.64
Hmga1P17095 Gm5543-201ENSMUST00000193329 1091 ntBASIC11.03□□□□□ -0.64
Hmga1P17095 AC134860.2-201ENSMUST00000225277 1036 ntBASIC11.03□□□□□ -0.64
Hmga1P17095 AC101205.2-201ENSMUST00000226206 715 ntBASIC11.03□□□□□ -0.64
Hmga1P17095 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmga1P17095 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC11.03□□□□□ -0.64
Hmga1P17095 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmga1P17095 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmga1P17095 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Hmga1P17095 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmga1P17095 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmga1P17095 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.03□□□□□ -0.64
Hmga1P17095 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmga1P17095 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmga1P17095 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmga1P17095 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmga1P17095 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hmga1P17095 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hmga1P17095 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hmga1P17095 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.02□□□□□ -0.64
Hmga1P17095 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hmga1P17095 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hmga1P17095 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hmga1P17095 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.02□□□□□ -0.64
Hmga1P17095 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hmga1P17095 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hmga1P17095 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hmga1P17095 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hmga1P17095 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hmga1P17095 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmga1P17095 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hmga1P17095 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmga1P17095 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmga1P17095 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmga1P17095 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmga1P17095 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Hmga1P17095 Gm12418-201ENSMUST00000118116 942 ntBASIC11.02□□□□□ -0.65
Hmga1P17095 Gm11573-201ENSMUST00000119956 394 ntBASIC11.02□□□□□ -0.65
Hmga1P17095 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC11.02□□□□□ -0.65
Hmga1P17095 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hmga1P17095 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hmga1P17095 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hmga1P17095 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC11.02□□□□□ -0.65
Hmga1P17095 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Hmga1P17095 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Hmga1P17095 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Hmga1P17095 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Hmga1P17095 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Hmga1P17095 Gm6686-201ENSMUST00000178455 258 ntBASIC11.02□□□□□ -0.65
Hmga1P17095 Gm24954-201ENSMUST00000178831 110 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms