Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC11.17□□□□□ -0.62
Atf6F6VAN0 Gm42851-201ENSMUST00000201325 1411 ntBASIC11.17□□□□□ -0.62
Atf6F6VAN0 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.16□□□□□ -0.62
Atf6F6VAN0 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.16□□□□□ -0.62
Atf6F6VAN0 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Gm13899-201ENSMUST00000121519 1255 ntBASIC11.16□□□□□ -0.62
Atf6F6VAN0 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Gm24398-201ENSMUST00000157870 109 ntBASIC11.16□□□□□ -0.62
Atf6F6VAN0 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Mir7076-201ENSMUST00000183519 74 ntBASIC11.16□□□□□ -0.62
Atf6F6VAN0 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.16□□□□□ -0.62
Atf6F6VAN0 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.16□□□□□ -0.62
Atf6F6VAN0 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.16□□□□□ -0.62
Atf6F6VAN0 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Atf6F6VAN0 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.16□□□□□ -0.62
Atf6F6VAN0 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6F6VAN0 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Atf6F6VAN0 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.15□□□□□ -0.62
Atf6F6VAN0 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6F6VAN0 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6F6VAN0 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6F6VAN0 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6F6VAN0 Gm14892-201ENSMUST00000117636 267 ntBASIC11.15□□□□□ -0.62
Atf6F6VAN0 Gm15131-201ENSMUST00000119124 595 ntBASIC11.15□□□□□ -0.62
Atf6F6VAN0 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6F6VAN0 Gm6407-201ENSMUST00000176468 549 ntBASIC11.15□□□□□ -0.62
Atf6F6VAN0 Gm7985-201ENSMUST00000183329 981 ntBASIC11.15□□□□□ -0.62
Atf6F6VAN0 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC11.15□□□□□ -0.62
Atf6F6VAN0 Gm37597-201ENSMUST00000191853 382 ntBASIC11.15□□□□□ -0.62
Atf6F6VAN0 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.15□□□□□ -0.62
Atf6F6VAN0 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.15□□□□□ -0.62
Atf6F6VAN0 Gm40414-201ENSMUST00000197608 481 ntBASIC11.15□□□□□ -0.62
Atf6F6VAN0 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.15□□□□□ -0.62
Atf6F6VAN0 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.15□□□□□ -0.62
Atf6F6VAN0 Gm44126-201ENSMUST00000204831 514 ntBASIC11.15□□□□□ -0.62
Atf6F6VAN0 Gm2594-201ENSMUST00000214774 742 ntBASIC11.15□□□□□ -0.62
Atf6F6VAN0 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Atf6F6VAN0 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.15□□□□□ -0.62
Atf6F6VAN0 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6F6VAN0 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6F6VAN0 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.15□□□□□ -0.62
Atf6F6VAN0 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms