Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Gm43143-201ENSMUST00000196083 2023 ntBASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trim13Q9CYB0 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Gm43372-201ENSMUST00000202662 3016 ntBASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Rims2-204ENSMUST00000226410 3685 ntBASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Gm12579-201ENSMUST00000118040 783 ntBASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Gm15329-201ENSMUST00000121408 155 ntBASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Gm14017-201ENSMUST00000121934 386 ntBASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Gm25226-201ENSMUST00000158198 123 ntBASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Gm2383-201ENSMUST00000181461 807 ntBASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trim13Q9CYB0 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Enah-211ENSMUST00000193703 11229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Gm15549-201ENSMUST00000121595 622 ntBASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Gm25881-201ENSMUST00000157783 103 ntBASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms