Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm40414-201ENSMUST00000197608 481 ntBASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 CT025538.1-201ENSMUST00000223638 369 ntBASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 CT025547.1-201ENSMUST00000225127 578 ntBASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Gm6425-201ENSMUST00000136332 790 ntBASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Gm13898-201ENSMUST00000141865 610 ntBASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Mipep-ps-201ENSMUST00000177439 291 ntBASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Gm44716-201ENSMUST00000209007 710 ntBASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 AC151971.6-201ENSMUST00000216193 866 ntBASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 AC156274.1-201ENSMUST00000219193 634 ntBASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx54Q8K4L0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Gm4865-201ENSMUST00000196284 1309 ntBASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Apela-201ENSMUST00000124790 945 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Gm5244-201ENSMUST00000164001 339 ntBASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Gm28179-201ENSMUST00000188365 613 ntBASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Rbp2-204ENSMUST00000189446 803 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Gm42875-201ENSMUST00000197674 1015 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Olfr139-203ENSMUST00000206280 1059 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 CT025642.1-201ENSMUST00000224734 1219 ntBASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Gm13169-201ENSMUST00000122090 1459 ntBASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC14.18□□□□□ -0.14
Ddx54Q8K4L0 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx54Q8K4L0 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx54Q8K4L0 Gm42651-201ENSMUST00000199851 1339 ntBASIC14.17□□□□□ -0.14
Ddx54Q8K4L0 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx54Q8K4L0 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx54Q8K4L0 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx54Q8K4L0 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx54Q8K4L0 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx54Q8K4L0 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx54Q8K4L0 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx54Q8K4L0 Gm11235-201ENSMUST00000117763 333 ntBASIC14.17□□□□□ -0.14
Ddx54Q8K4L0 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms