Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Ap1g1-206ENSMUST00000179104 1096 ntBASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Gm7255-201ENSMUST00000187371 908 ntBASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 CT030182.1-201ENSMUST00000225935 533 ntBASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Gm1821-202ENSMUST00000227415 750 ntBASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Gm5468-202ENSMUST00000227851 682 ntBASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Rcan2-201ENSMUST00000044792 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Gm26772-201ENSMUST00000180466 3429 ntTSL 5 BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Gm14028-201ENSMUST00000117434 479 ntBASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Gm15352-201ENSMUST00000118696 270 ntBASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Gm4917-201ENSMUST00000121452 650 ntBASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Gm10774-201ENSMUST00000188689 204 ntBASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Gm7848-201ENSMUST00000210739 718 ntBASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Gm23105-201ENSMUST00000083719 134 ntBASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Tal2-201ENSMUST00000030124 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Klhl7-202ENSMUST00000163409 2857 ntTSL 2 BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 AC154849.3-201ENSMUST00000223733 1660 ntBASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC9.16□□□□□ -0.94
Nhlrc3Q8CCH2 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 AC140462.2-201ENSMUST00000225718 2433 ntBASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Gm38001-201ENSMUST00000192900 3761 ntBASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Gm10531-201ENSMUST00000193527 2303 ntBASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Mthfr-202ENSMUST00000097788 2652 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Nhlrc3Q8CCH2 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms