Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Gm11380-201ENSMUST00000118067 560 ntBASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Gm15196-201ENSMUST00000121406 482 ntBASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Gm15620-201ENSMUST00000122949 270 ntBASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Gm4862-201ENSMUST00000170405 438 ntBASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Mir8091-201ENSMUST00000183602 139 ntBASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Gm28032-201ENSMUST00000184104 96 ntBASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Gm31274-201ENSMUST00000197356 229 ntBASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 CT025561.1-201ENSMUST00000214972 674 ntBASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 AC154176.1-201ENSMUST00000225897 220 ntBASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Gm11619-201ENSMUST00000117474 237 ntBASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Gm15003-201ENSMUST00000118884 446 ntBASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Gm13333-201ENSMUST00000119424 781 ntBASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Gm6758-201ENSMUST00000119643 1055 ntBASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Gm12969-201ENSMUST00000120199 1004 ntBASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Gm5621-201ENSMUST00000187303 640 ntBASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Gm5302-201ENSMUST00000202130 796 ntBASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh19Q80TF3 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms