Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Ggct-202ENSMUST00000131475 3960 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Gm37731-201ENSMUST00000194545 2237 ntBASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Limk1-202ENSMUST00000111233 3109 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf220Q6PDX6 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Heatr4-201ENSMUST00000164935 3038 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Olfm4-203ENSMUST00000228749 2801 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Zfp384-203ENSMUST00000084275 2829 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Scrn3-201ENSMUST00000090811 3309 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Tubd1-205ENSMUST00000167178 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Gm13497-201ENSMUST00000139497 2038 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Gm24255-201ENSMUST00000104481 128 ntBASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Gm38321-201ENSMUST00000195053 235 ntBASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 AY036118-201ENSMUST00000200021 923 ntBASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Gm45224-201ENSMUST00000208203 414 ntBASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Gm7940-201ENSMUST00000218195 769 ntBASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Pwp1-201ENSMUST00000001836 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Fam124b-201ENSMUST00000058748 2855 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Trp63-203ENSMUST00000115304 2634 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Gtpbp8-204ENSMUST00000162512 3415 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Gm42833-201ENSMUST00000196019 2124 ntBASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Stxbp5l-203ENSMUST00000114780 3476 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 CT025639.2-202ENSMUST00000225298 1630 ntBASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Sdc2-201ENSMUST00000022871 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Gm45170-201ENSMUST00000206746 1671 ntBASIC10.25□□□□□ -0.77
Rnf220Q6PDX6 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Ppcdc-201ENSMUST00000085709 2744 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Gm44629-201ENSMUST00000206951 1840 ntBASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Gm14127-201ENSMUST00000117906 678 ntBASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Gm44364-201ENSMUST00000198368 141 ntBASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Gm3961-201ENSMUST00000204425 994 ntBASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf220Q6PDX6 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms