Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Gm11380-201ENSMUST00000118067 560 ntBASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Gm5529-201ENSMUST00000165691 891 ntBASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Mir8091-201ENSMUST00000183602 139 ntBASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Gm18776-201ENSMUST00000188833 654 ntBASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Gm37301-201ENSMUST00000195412 568 ntBASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Gm40414-201ENSMUST00000197608 481 ntBASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Gm7589-201ENSMUST00000085631 534 ntBASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Upf3bQ3ULL6 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Gm14497-201ENSMUST00000119537 580 ntBASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Gm12570-201ENSMUST00000122047 1030 ntBASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Gm28324-201ENSMUST00000187913 264 ntBASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Gm28833-201ENSMUST00000189671 559 ntBASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Gm33080-201ENSMUST00000205429 172 ntBASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Gm45219-201ENSMUST00000205602 465 ntBASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upf3bQ3ULL6 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upf3bQ3ULL6 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upf3bQ3ULL6 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Upf3bQ3ULL6 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.61□□□□□ -0.55
Upf3bQ3ULL6 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upf3bQ3ULL6 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.61□□□□□ -0.55
Upf3bQ3ULL6 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upf3bQ3ULL6 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.61□□□□□ -0.55
Upf3bQ3ULL6 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upf3bQ3ULL6 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upf3bQ3ULL6 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upf3bQ3ULL6 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upf3bQ3ULL6 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upf3bQ3ULL6 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upf3bQ3ULL6 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upf3bQ3ULL6 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Upf3bQ3ULL6 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upf3bQ3ULL6 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upf3bQ3ULL6 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.61□□□□□ -0.55
Upf3bQ3ULL6 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Upf3bQ3ULL6 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.61□□□□□ -0.55
Upf3bQ3ULL6 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.61□□□□□ -0.55
Upf3bQ3ULL6 Mir1905-201ENSMUST00000122779 82 ntBASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms