Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcr4P70658 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.19□□□□□ -0.78
Cxcr4P70658 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.19□□□□□ -0.78
Cxcr4P70658 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcr4P70658 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Cxcr4P70658 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcr4P70658 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Cxcr4P70658 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcr4P70658 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcr4P70658 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcr4P70658 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cxcr4P70658 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcr4P70658 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcr4P70658 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcr4P70658 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcr4P70658 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcr4P70658 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.18□□□□□ -0.78
Cxcr4P70658 Gm37264-201ENSMUST00000194916 2192 ntBASIC10.18□□□□□ -0.78
Cxcr4P70658 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cxcr4P70658 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cxcr4P70658 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.18□□□□□ -0.78
Cxcr4P70658 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
Cxcr4P70658 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Gm25766-201ENSMUST00000104101 131 ntBASIC10.18□□□□□ -0.78
Cxcr4P70658 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC10.18□□□□□ -0.78
Cxcr4P70658 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cxcr4P70658 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cxcr4P70658 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Gm14395-201ENSMUST00000120494 563 ntBASIC10.18□□□□□ -0.78
Cxcr4P70658 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Cxcr4P70658 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Cxcr4P70658 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC10.18□□□□□ -0.78
Cxcr4P70658 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.18□□□□□ -0.78
Cxcr4P70658 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC10.18□□□□□ -0.78
Cxcr4P70658 Gm23694-201ENSMUST00000179335 110 ntBASIC10.18□□□□□ -0.78
Cxcr4P70658 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC10.18□□□□□ -0.78
Cxcr4P70658 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10.18□□□□□ -0.78
Cxcr4P70658 Gm37905-201ENSMUST00000195310 341 ntBASIC10.18□□□□□ -0.78
Cxcr4P70658 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC10.18□□□□□ -0.78
Cxcr4P70658 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC10.18□□□□□ -0.78
Cxcr4P70658 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.18□□□□□ -0.78
Cxcr4P70658 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Cxcr4P70658 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cxcr4P70658 Gm23680-201ENSMUST00000083162 164 ntBASIC10.18□□□□□ -0.78
Cxcr4P70658 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.18□□□□□ -0.78
Cxcr4P70658 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcr4P70658 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Cxcr4P70658 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcr4P70658 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcr4P70658 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC10.17□□□□□ -0.78
Cxcr4P70658 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC10.17□□□□□ -0.78
Cxcr4P70658 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcr4P70658 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Cxcr4P70658 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcr4P70658 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcr4P70658 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcr4P70658 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcr4P70658 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcr4P70658 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Cxcr4P70658 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Cxcr4P70658 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcr4P70658 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcr4P70658 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Cxcr4P70658 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcr4P70658 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcr4P70658 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcr4P70658 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Cxcr4P70658 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcr4P70658 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcr4P70658 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Cxcr4P70658 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Cxcr4P70658 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcr4P70658 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Cxcr4P70658 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Cxcr4P70658 Gm13422-201ENSMUST00000118834 504 ntBASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms