Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
SftpbP50405 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SftpbP50405 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SftpbP50405 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SftpbP50405 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.07□□□□□ -0.64
SftpbP50405 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
SftpbP50405 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.06□□□□□ -0.64
SftpbP50405 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.06□□□□□ -0.64
SftpbP50405 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.06□□□□□ -0.64
SftpbP50405 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SftpbP50405 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.06□□□□□ -0.64
SftpbP50405 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SftpbP50405 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
SftpbP50405 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.06□□□□□ -0.64
SftpbP50405 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SftpbP50405 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
SftpbP50405 Nln-205ENSMUST00000224945 2486 ntBASIC11.06□□□□□ -0.64
SftpbP50405 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
SftpbP50405 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.06□□□□□ -0.64
SftpbP50405 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.06□□□□□ -0.64
SftpbP50405 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.06□□□□□ -0.64
SftpbP50405 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.06□□□□□ -0.64
SftpbP50405 Gm21092-201ENSMUST00000178995 955 ntBASIC11.06□□□□□ -0.64
SftpbP50405 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SftpbP50405 Gm29199-201ENSMUST00000187766 775 ntBASIC11.06□□□□□ -0.64
SftpbP50405 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.06□□□□□ -0.64
SftpbP50405 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.06□□□□□ -0.64
SftpbP50405 Gm30946-201ENSMUST00000198288 724 ntBASIC11.06□□□□□ -0.64
SftpbP50405 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.06□□□□□ -0.64
SftpbP50405 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SftpbP50405 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC11.06□□□□□ -0.64
SftpbP50405 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.06□□□□□ -0.64
SftpbP50405 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
SftpbP50405 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.06□□□□□ -0.64
SftpbP50405 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SftpbP50405 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SftpbP50405 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SftpbP50405 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Gm7742-201ENSMUST00000167648 1527 ntBASIC11.05□□□□□ -0.64
SftpbP50405 Gm7732-201ENSMUST00000170486 1527 ntBASIC11.05□□□□□ -0.64
SftpbP50405 Gm7740-201ENSMUST00000186171 1527 ntBASIC11.05□□□□□ -0.64
SftpbP50405 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
SftpbP50405 Gm7736-201ENSMUST00000096981 1527 ntBASIC11.05□□□□□ -0.64
SftpbP50405 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.05□□□□□ -0.64
SftpbP50405 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SftpbP50405 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Gm25076-201ENSMUST00000104098 132 ntBASIC11.05□□□□□ -0.64
SftpbP50405 Gm4909-201ENSMUST00000118749 794 ntBASIC11.05□□□□□ -0.64
SftpbP50405 Gm8737-201ENSMUST00000122208 642 ntBASIC11.05□□□□□ -0.64
SftpbP50405 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.05□□□□□ -0.64
SftpbP50405 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.05□□□□□ -0.64
SftpbP50405 Platr10-202ENSMUST00000191479 818 ntBASIC11.05□□□□□ -0.64
SftpbP50405 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SftpbP50405 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.05□□□□□ -0.64
SftpbP50405 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.05□□□□□ -0.64
SftpbP50405 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
SftpbP50405 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.05□□□□□ -0.64
SftpbP50405 Gm18042-201ENSMUST00000219887 790 ntBASIC11.05□□□□□ -0.64
SftpbP50405 AC122367.1-201ENSMUST00000221978 1709 ntBASIC11.05□□□□□ -0.64
SftpbP50405 Spcs1-203ENSMUST00000226374 592 ntBASIC11.05□□□□□ -0.64
SftpbP50405 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
SftpbP50405 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SftpbP50405 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
SftpbP50405 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms