Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC9.82□□□□□ -0.84
Rfx3P48381 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC9.82□□□□□ -0.84
Rfx3P48381 AC140462.2-201ENSMUST00000225718 2433 ntBASIC9.82□□□□□ -0.84
Rfx3P48381 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC9.82□□□□□ -0.84
Rfx3P48381 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC9.82□□□□□ -0.84
Rfx3P48381 Gm10051-201ENSMUST00000145209 414 ntBASIC9.82□□□□□ -0.84
Rfx3P48381 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC9.82□□□□□ -0.84
Rfx3P48381 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC9.82□□□□□ -0.84
Rfx3P48381 Gm21092-201ENSMUST00000178995 955 ntBASIC9.82□□□□□ -0.84
Rfx3P48381 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC9.82□□□□□ -0.84
Rfx3P48381 Gm9555-201ENSMUST00000200908 583 ntBASIC9.82□□□□□ -0.84
Rfx3P48381 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Rfx3P48381 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 AC124732.3-201ENSMUST00000221835 1765 ntBASIC9.82□□□□□ -0.84
Rfx3P48381 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Rfx3P48381 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
Rfx3P48381 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 Gm43372-201ENSMUST00000202662 3016 ntBASIC9.82□□□□□ -0.84
Rfx3P48381 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 Gm9415-201ENSMUST00000200462 1321 ntBASIC9.82□□□□□ -0.84
Rfx3P48381 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Rfx3P48381 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Rfx3P48381 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Rfx3P48381 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC9.81□□□□□ -0.84
Rfx3P48381 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC9.81□□□□□ -0.84
Rfx3P48381 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Rfx3P48381 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC9.81□□□□□ -0.84
Rfx3P48381 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Rfx3P48381 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC9.81□□□□□ -0.84
Rfx3P48381 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC9.81□□□□□ -0.84
Rfx3P48381 Gm15528-201ENSMUST00000117821 864 ntBASIC9.81□□□□□ -0.84
Rfx3P48381 Gm13611-201ENSMUST00000118269 318 ntBASIC9.81□□□□□ -0.84
Rfx3P48381 Gm15573-201ENSMUST00000119487 540 ntBASIC9.81□□□□□ -0.84
Rfx3P48381 Gm14395-201ENSMUST00000120494 563 ntBASIC9.81□□□□□ -0.84
Rfx3P48381 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.81□□□□□ -0.84
Rfx3P48381 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC9.81□□□□□ -0.84
Rfx3P48381 Gm22334-201ENSMUST00000158070 133 ntBASIC9.81□□□□□ -0.84
Rfx3P48381 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC9.81□□□□□ -0.84
Rfx3P48381 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Rfx3P48381 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC9.81□□□□□ -0.84
Rfx3P48381 Gm38321-201ENSMUST00000195053 235 ntBASIC9.81□□□□□ -0.84
Rfx3P48381 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC9.81□□□□□ -0.84
Rfx3P48381 Gm43667-201ENSMUST00000198616 1095 ntBASIC9.81□□□□□ -0.84
Rfx3P48381 Gm5302-201ENSMUST00000202130 796 ntBASIC9.81□□□□□ -0.84
Rfx3P48381 Gm10109-202ENSMUST00000206890 1211 ntBASIC9.81□□□□□ -0.84
Rfx3P48381 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC9.81□□□□□ -0.84
Rfx3P48381 AC122024.3-201ENSMUST00000217719 294 ntBASIC9.81□□□□□ -0.84
Rfx3P48381 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Rfx3P48381 Gm19046-201ENSMUST00000221263 1298 ntBASIC9.81□□□□□ -0.84
Rfx3P48381 AC154461.3-201ENSMUST00000224831 573 ntBASIC9.81□□□□□ -0.84
Rfx3P48381 AC137950.2-201ENSMUST00000227127 1089 ntBASIC9.81□□□□□ -0.84
Rfx3P48381 Gm6781-201ENSMUST00000038304 1242 ntBASIC9.81□□□□□ -0.84
Rfx3P48381 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Rfx3P48381 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
Rfx3P48381 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Gm21998-201ENSMUST00000117552 1308 ntBASIC9.81□□□□□ -0.84
Rfx3P48381 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rfx3P48381 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms