Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cxcl12P40224 Mir705-201ENSMUST00000102058 82 ntBASIC11.18□□□□□ -0.62
Cxcl12P40224 Gm24161-201ENSMUST00000104592 130 ntBASIC11.18□□□□□ -0.62
Cxcl12P40224 Gm5071-201ENSMUST00000104922 1035 ntBASIC11.18□□□□□ -0.62
Cxcl12P40224 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcl12P40224 Banf2os-201ENSMUST00000124061 771 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcl12P40224 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC11.18□□□□□ -0.62
Cxcl12P40224 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcl12P40224 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC11.18□□□□□ -0.62
Cxcl12P40224 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcl12P40224 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cxcl12P40224 Gm22669-201ENSMUST00000158723 318 ntBASIC11.18□□□□□ -0.62
Cxcl12P40224 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cxcl12P40224 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cxcl12P40224 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcl12P40224 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cxcl12P40224 Gm9273-201ENSMUST00000200606 715 ntBASIC11.18□□□□□ -0.62
Cxcl12P40224 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC11.18□□□□□ -0.62
Cxcl12P40224 Gm45308-201ENSMUST00000210610 415 ntBASIC11.18□□□□□ -0.62
Cxcl12P40224 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC11.18□□□□□ -0.62
Cxcl12P40224 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcl12P40224 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC11.18□□□□□ -0.62
Cxcl12P40224 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC11.18□□□□□ -0.62
Cxcl12P40224 Gm8557-201ENSMUST00000220777 475 ntBASIC11.18□□□□□ -0.62
Cxcl12P40224 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC11.18□□□□□ -0.62
Cxcl12P40224 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cxcl12P40224 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcl12P40224 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcl12P40224 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcl12P40224 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcl12P40224 Gm42833-201ENSMUST00000196019 2124 ntBASIC11.18□□□□□ -0.62
Cxcl12P40224 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cxcl12P40224 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcl12P40224 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcl12P40224 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcl12P40224 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcl12P40224 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcl12P40224 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Cxcl12P40224 Gm38312-201ENSMUST00000195426 1746 ntBASIC11.18□□□□□ -0.62
Cxcl12P40224 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcl12P40224 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcl12P40224 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcl12P40224 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcl12P40224 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cxcl12P40224 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl12P40224 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl12P40224 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl12P40224 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.17□□□□□ -0.62
Cxcl12P40224 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.17□□□□□ -0.62
Cxcl12P40224 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl12P40224 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl12P40224 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.17□□□□□ -0.62
Cxcl12P40224 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl12P40224 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.17□□□□□ -0.62
Cxcl12P40224 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl12P40224 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.17□□□□□ -0.62
Cxcl12P40224 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl12P40224 n-R5s154-201ENSMUST00000122513 108 ntBASIC11.17□□□□□ -0.62
Cxcl12P40224 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl12P40224 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl12P40224 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC11.17□□□□□ -0.62
Cxcl12P40224 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC11.17□□□□□ -0.62
Cxcl12P40224 Gm5766-202ENSMUST00000161633 799 ntBASIC11.17□□□□□ -0.62
Cxcl12P40224 Gm5501-201ENSMUST00000165917 832 ntBASIC11.17□□□□□ -0.62
Cxcl12P40224 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl12P40224 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC11.17□□□□□ -0.62
Cxcl12P40224 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC11.17□□□□□ -0.62
Cxcl12P40224 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl12P40224 Gm7815-201ENSMUST00000196104 832 ntBASIC11.17□□□□□ -0.62
Cxcl12P40224 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.17□□□□□ -0.62
Cxcl12P40224 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl12P40224 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC11.17□□□□□ -0.62
Cxcl12P40224 Gm3889-201ENSMUST00000212467 612 ntBASIC11.17□□□□□ -0.62
Cxcl12P40224 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC11.17□□□□□ -0.62
Cxcl12P40224 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC11.17□□□□□ -0.62
Cxcl12P40224 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cxcl12P40224 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Cxcl12P40224 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl12P40224 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl12P40224 Gm26440-201ENSMUST00000082591 129 ntBASIC11.17□□□□□ -0.62
Cxcl12P40224 Mir194-2-201ENSMUST00000083648 86 ntBASIC11.17□□□□□ -0.62
Cxcl12P40224 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl12P40224 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl12P40224 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl12P40224 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Cxcl12P40224 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl12P40224 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl12P40224 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl12P40224 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Cxcl12P40224 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcl12P40224 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Gm38034-201ENSMUST00000193915 2069 ntBASIC11.16□□□□□ -0.62
Cxcl12P40224 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cxcl12P40224 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cxcl12P40224 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cxcl12P40224 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms