Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC12.6□□□□□ -0.39
Col1a1P11087 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Col1a1P11087 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col1a1P11087 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col1a1P11087 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.6□□□□□ -0.39
Col1a1P11087 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col1a1P11087 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col1a1P11087 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col1a1P11087 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col1a1P11087 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col1a1P11087 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col1a1P11087 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Col1a1P11087 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col1a1P11087 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col1a1P11087 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Col1a1P11087 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col1a1P11087 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col1a1P11087 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col1a1P11087 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col1a1P11087 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.6□□□□□ -0.39
Col1a1P11087 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col1a1P11087 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col1a1P11087 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.6□□□□□ -0.39
Col1a1P11087 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col1a1P11087 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col1a1P11087 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col1a1P11087 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col1a1P11087 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col1a1P11087 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.59□□□□□ -0.39
Col1a1P11087 Gm24066-201ENSMUST00000104515 131 ntBASIC12.59□□□□□ -0.39
Col1a1P11087 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col1a1P11087 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC12.59□□□□□ -0.39
Col1a1P11087 Gm23999-201ENSMUST00000158057 104 ntBASIC12.59□□□□□ -0.39
Col1a1P11087 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col1a1P11087 Gm29157-201ENSMUST00000188753 612 ntBASIC12.59□□□□□ -0.39
Col1a1P11087 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC12.59□□□□□ -0.39
Col1a1P11087 Gm29487-201ENSMUST00000190146 256 ntBASIC12.59□□□□□ -0.39
Col1a1P11087 Gm4866-201ENSMUST00000197408 589 ntBASIC12.59□□□□□ -0.39
Col1a1P11087 Gm44173-201ENSMUST00000204316 132 ntBASIC12.59□□□□□ -0.39
Col1a1P11087 Gm8960-201ENSMUST00000219787 788 ntBASIC12.59□□□□□ -0.39
Col1a1P11087 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col1a1P11087 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col1a1P11087 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col1a1P11087 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col1a1P11087 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col1a1P11087 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col1a1P11087 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col1a1P11087 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col1a1P11087 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.59□□□□□ -0.39
Col1a1P11087 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col1a1P11087 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC12.59□□□□□ -0.39
Col1a1P11087 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col1a1P11087 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col1a1P11087 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.59□□□□□ -0.39
Col1a1P11087 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col1a1P11087 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col1a1P11087 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col1a1P11087 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col1a1P11087 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Col1a1P11087 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.59□□□□□ -0.39
Col1a1P11087 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC12.59□□□□□ -0.39
Col1a1P11087 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col1a1P11087 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC12.59□□□□□ -0.39
Col1a1P11087 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC12.59□□□□□ -0.39
Col1a1P11087 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC12.59□□□□□ -0.39
Col1a1P11087 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC12.59□□□□□ -0.39
Col1a1P11087 Gm2328-201ENSMUST00000193525 535 ntBASIC12.59□□□□□ -0.39
Col1a1P11087 Gm4430-202ENSMUST00000193902 1041 ntBASIC12.59□□□□□ -0.39
Col1a1P11087 AC166061.1-201ENSMUST00000225163 1138 ntBASIC12.59□□□□□ -0.39
Col1a1P11087 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Col1a1P11087 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col1a1P11087 Gm5292-201ENSMUST00000073317 580 ntBASIC12.59□□□□□ -0.39
Col1a1P11087 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col1a1P11087 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col1a1P11087 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col1a1P11087 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Col1a1P11087 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col1a1P11087 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col1a1P11087 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col1a1P11087 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col1a1P11087 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col1a1P11087 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col1a1P11087 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Col1a1P11087 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col1a1P11087 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
Col1a1P11087 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col1a1P11087 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col1a1P11087 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.58□□□□□ -0.4
Col1a1P11087 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col1a1P11087 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col1a1P11087 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col1a1P11087 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col1a1P11087 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col1a1P11087 Gm16439-201ENSMUST00000100687 564 ntBASIC12.58□□□□□ -0.4
Col1a1P11087 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Col1a1P11087 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Col1a1P11087 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col1a1P11087 B130024G19Rik-204ENSMUST00000191084 634 ntTSL 5 BASIC12.58□□□□□ -0.4
Col1a1P11087 Gm5865-201ENSMUST00000198713 637 ntBASIC12.58□□□□□ -0.4
Col1a1P11087 CT025618.1-201ENSMUST00000227409 1279 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms