Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Gm7357-201ENSMUST00000195361 2991 ntBASIC9.43□□□□□ -0.9
UbbP0CG49 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
UbbP0CG49 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Gm22920-201ENSMUST00000102175 109 ntBASIC9.43□□□□□ -0.9
UbbP0CG49 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC9.43□□□□□ -0.9
UbbP0CG49 Gm22711-201ENSMUST00000116890 133 ntBASIC9.43□□□□□ -0.9
UbbP0CG49 Gm7851-201ENSMUST00000117574 323 ntBASIC9.43□□□□□ -0.9
UbbP0CG49 Gm15528-201ENSMUST00000117821 864 ntBASIC9.43□□□□□ -0.9
UbbP0CG49 Gm15515-201ENSMUST00000117827 822 ntBASIC9.43□□□□□ -0.9
UbbP0CG49 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC9.43□□□□□ -0.9
UbbP0CG49 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC9.43□□□□□ -0.9
UbbP0CG49 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC9.43□□□□□ -0.9
UbbP0CG49 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Gm18212-201ENSMUST00000211678 889 ntBASIC9.43□□□□□ -0.9
UbbP0CG49 AC122024.3-201ENSMUST00000217719 294 ntBASIC9.43□□□□□ -0.9
UbbP0CG49 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC9.43□□□□□ -0.9
UbbP0CG49 AC137950.2-201ENSMUST00000227127 1089 ntBASIC9.43□□□□□ -0.9
UbbP0CG49 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
UbbP0CG49 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC9.43□□□□□ -0.9
UbbP0CG49 AC131029.1-201ENSMUST00000226391 2929 ntBASIC9.43□□□□□ -0.9
UbbP0CG49 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC9.43□□□□□ -0.9
UbbP0CG49 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC9.43□□□□□ -0.9
UbbP0CG49 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Gm45501-201ENSMUST00000211468 2526 ntBASIC9.43□□□□□ -0.9
UbbP0CG49 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC9.43□□□□□ -0.9
UbbP0CG49 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
UbbP0CG49 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
UbbP0CG49 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UbbP0CG49 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 Gm21817-201ENSMUST00000178584 2583 ntBASIC9.42□□□□□ -0.9
UbbP0CG49 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 Gm44798-201ENSMUST00000208123 2410 ntBASIC9.42□□□□□ -0.9
UbbP0CG49 AA474408-201ENSMUST00000098110 3339 ntBASIC9.42□□□□□ -0.9
UbbP0CG49 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.42□□□□□ -0.9
UbbP0CG49 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.42□□□□□ -0.9
UbbP0CG49 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
UbbP0CG49 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.42□□□□□ -0.9
UbbP0CG49 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC9.42□□□□□ -0.9
UbbP0CG49 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC9.42□□□□□ -0.9
UbbP0CG49 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC9.42□□□□□ -0.9
UbbP0CG49 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
UbbP0CG49 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 Gm24992-201ENSMUST00000157412 130 ntBASIC9.42□□□□□ -0.9
UbbP0CG49 Gm6397-201ENSMUST00000161973 1069 ntBASIC9.42□□□□□ -0.9
UbbP0CG49 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC9.42□□□□□ -0.9
UbbP0CG49 Gm7584-201ENSMUST00000175829 940 ntBASIC9.42□□□□□ -0.9
UbbP0CG49 Gm4819-201ENSMUST00000182170 1009 ntBASIC9.42□□□□□ -0.9
UbbP0CG49 Mir7051-201ENSMUST00000184167 73 ntBASIC9.42□□□□□ -0.9
UbbP0CG49 Platr10-202ENSMUST00000191479 818 ntBASIC9.42□□□□□ -0.9
UbbP0CG49 Hyal2-206ENSMUST00000195681 2968 ntBASIC9.42□□□□□ -0.9
UbbP0CG49 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
UbbP0CG49 Rassf8-202ENSMUST00000058538 1131 ntBASIC9.42□□□□□ -0.9
UbbP0CG49 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
UbbP0CG49 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
UbbP0CG49 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 Olfr584-201ENSMUST00000098210 964 ntBASIC9.42□□□□□ -0.9
UbbP0CG49 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 Gm45597-201ENSMUST00000211524 1994 ntBASIC9.42□□□□□ -0.9
UbbP0CG49 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UbbP0CG49 Gm42571-201ENSMUST00000201197 2464 ntBASIC9.42□□□□□ -0.9
UbbP0CG49 Gm43014-201ENSMUST00000198568 2443 ntBASIC9.42□□□□□ -0.9
UbbP0CG49 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms