Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
P04224 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
P04224 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
P04224 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
P04224 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
P04224 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
P04224 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.52□□□□□ -0.89
P04224 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
P04224 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Trio-210ENSMUST00000227337 6375 ntBASIC9.51□□□□□ -0.89
P04224 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Myo6-201ENSMUST00000035889 7871 ntTSL 5 BASIC9.51□□□□□ -0.89
P04224 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC9.51□□□□□ -0.89
P04224 Eif4e1b-206ENSMUST00000132728 1897 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
P04224 Edil3-201ENSMUST00000043111 5156 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 4933414I15Rik-201ENSMUST00000109123 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Gm14127-201ENSMUST00000117906 678 ntBASIC9.51□□□□□ -0.89
P04224 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.51□□□□□ -0.89
P04224 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC9.51□□□□□ -0.89
P04224 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Mir7677-201ENSMUST00000184226 67 ntBASIC9.51□□□□□ -0.89
P04224 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC9.51□□□□□ -0.89
P04224 Gm38341-201ENSMUST00000195357 515 ntBASIC9.51□□□□□ -0.89
P04224 Gm44967-201ENSMUST00000207047 631 ntBASIC9.51□□□□□ -0.89
P04224 Gm45113-201ENSMUST00000207518 165 ntBASIC9.51□□□□□ -0.89
P04224 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Gm6653-201ENSMUST00000218063 1288 ntBASIC9.51□□□□□ -0.89
P04224 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC9.51□□□□□ -0.89
P04224 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
P04224 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Gm17383-201ENSMUST00000078739 1041 ntBASIC9.51□□□□□ -0.89
P04224 Gm10634-202ENSMUST00000188891 2464 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
P04224 Gm13140-201ENSMUST00000119840 3151 ntBASIC9.51□□□□□ -0.89
P04224 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
P04224 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Acad10-202ENSMUST00000111770 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC9.51□□□□□ -0.89
P04224 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
P04224 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Olfr366-202ENSMUST00000214897 5333 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
P04224 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
P04224 Ilf3-208ENSMUST00000214758 3177 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
P04224 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
P04224 Cd160-203ENSMUST00000165991 2458 ntAPPRIS ALT2 TSL 3 BASIC9.5□□□□□ -0.89
P04224 Gm38357-201ENSMUST00000195382 2464 ntBASIC9.5□□□□□ -0.89
P04224 Pkd1l2-202ENSMUST00000109093 7389 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
P04224 Pkd1l2-201ENSMUST00000098375 7386 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
P04224 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
P04224 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 D430042O09Rik-203ENSMUST00000124223 5874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Osbpl5-201ENSMUST00000020411 3994 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 L3mbtl3-201ENSMUST00000040219 4572 ntAPPRIS P3 TSL 5 BASIC9.5□□□□□ -0.89
P04224 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Myadm-201ENSMUST00000096744 2814 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
P04224 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
P04224 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.5□□□□□ -0.89
P04224 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC9.5□□□□□ -0.89
P04224 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC9.5□□□□□ -0.89
P04224 Gm26361-201ENSMUST00000158868 186 ntBASIC9.5□□□□□ -0.89
P04224 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
P04224 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC9.5□□□□□ -0.89
P04224 Mir8109-201ENSMUST00000184375 117 ntBASIC9.5□□□□□ -0.89
P04224 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Gm28071-201ENSMUST00000190355 478 ntBASIC9.5□□□□□ -0.89
P04224 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Ighv5-7-201ENSMUST00000192302 244 ntBASIC9.5□□□□□ -0.89
P04224 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
P04224 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC9.5□□□□□ -0.89
P04224 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC9.5□□□□□ -0.89
P04224 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 180.1 ms