Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm14699-201ENSMUST00000122340 228 ntBASIC19.56■□□□□ 0.72
Ccdc180J3QNE4 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc180J3QNE4 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC19.56■□□□□ 0.72
Ccdc180J3QNE4 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC19.56■□□□□ 0.72
Ccdc180J3QNE4 Gm23432-201ENSMUST00000157181 131 ntBASIC19.56■□□□□ 0.72
Ccdc180J3QNE4 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc180J3QNE4 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC19.56■□□□□ 0.72
Ccdc180J3QNE4 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc180J3QNE4 Gm37009-201ENSMUST00000193297 361 ntBASIC19.56■□□□□ 0.72
Ccdc180J3QNE4 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ccdc180J3QNE4 Gm5291-201ENSMUST00000201965 899 ntBASIC19.56■□□□□ 0.72
Ccdc180J3QNE4 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Gm37697-201ENSMUST00000195680 1844 ntBASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Gm43052-201ENSMUST00000201451 1628 ntBASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Gm45170-201ENSMUST00000206746 1671 ntBASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Gm12489-201ENSMUST00000119364 148 ntBASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Gm23999-201ENSMUST00000158057 104 ntBASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 AC165092.1-201ENSMUST00000224018 486 ntBASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 A1cf-204ENSMUST00000224564 1432 ntBASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc180J3QNE4 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Gm5501-201ENSMUST00000165917 832 ntBASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Gm26875-201ENSMUST00000181006 950 ntBASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 AC153153.1-201ENSMUST00000225803 793 ntBASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Gm16477-201ENSMUST00000085365 801 ntBASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Gm17415-201ENSMUST00000096427 789 ntBASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc180J3QNE4 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc180J3QNE4 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc180J3QNE4 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc180J3QNE4 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc180J3QNE4 Gm13624-201ENSMUST00000120263 462 ntBASIC19.53■□□□□ 0.72
Ccdc180J3QNE4 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC19.53■□□□□ 0.72
Ccdc180J3QNE4 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC19.53■□□□□ 0.72
Ccdc180J3QNE4 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC19.53■□□□□ 0.72
Ccdc180J3QNE4 Gm44086-201ENSMUST00000203251 2349 ntBASIC19.53■□□□□ 0.72
Ccdc180J3QNE4 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc180J3QNE4 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC19.53■□□□□ 0.72
Ccdc180J3QNE4 Gm21939-201ENSMUST00000221137 2773 ntBASIC19.53■□□□□ 0.72
Ccdc180J3QNE4 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc180J3QNE4 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc180J3QNE4 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc180J3QNE4 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc180J3QNE4 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc180J3QNE4 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC19.52■□□□□ 0.72
Ccdc180J3QNE4 Gm11701-201ENSMUST00000121277 1142 ntBASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms