Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scrt1Q99M85 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.6□□□□□ -0.87
Scrt1Q99M85 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Gm22937-201ENSMUST00000103954 131 ntBASIC9.6□□□□□ -0.87
Scrt1Q99M85 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Gm13284-201ENSMUST00000121020 547 ntBASIC9.6□□□□□ -0.87
Scrt1Q99M85 Gm14113-201ENSMUST00000121399 976 ntBASIC9.6□□□□□ -0.87
Scrt1Q99M85 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC9.6□□□□□ -0.87
Scrt1Q99M85 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC9.6□□□□□ -0.87
Scrt1Q99M85 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Gm8756-201ENSMUST00000183250 929 ntBASIC9.6□□□□□ -0.87
Scrt1Q99M85 Mir6387-201ENSMUST00000184042 108 ntBASIC9.6□□□□□ -0.87
Scrt1Q99M85 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC9.6□□□□□ -0.87
Scrt1Q99M85 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC9.6□□□□□ -0.87
Scrt1Q99M85 Gm45310-201ENSMUST00000210436 275 ntBASIC9.6□□□□□ -0.87
Scrt1Q99M85 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Gm6331-201ENSMUST00000217890 450 ntBASIC9.6□□□□□ -0.87
Scrt1Q99M85 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Id2-203ENSMUST00000222667 958 ntBASIC9.6□□□□□ -0.87
Scrt1Q99M85 AC122035.1-201ENSMUST00000227576 1016 ntBASIC9.6□□□□□ -0.87
Scrt1Q99M85 AC137871.1-201ENSMUST00000228278 475 ntBASIC9.6□□□□□ -0.87
Scrt1Q99M85 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Scrt1Q99M85 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Gm43999-201ENSMUST00000204286 2889 ntBASIC9.6□□□□□ -0.87
Scrt1Q99M85 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scrt1Q99M85 Gm45089-201ENSMUST00000208082 2040 ntBASIC9.6□□□□□ -0.87
Scrt1Q99M85 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Scrt1Q99M85 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Scrt1Q99M85 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Gm15707-201ENSMUST00000118804 996 ntBASIC9.59□□□□□ -0.87
Scrt1Q99M85 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.59□□□□□ -0.87
Scrt1Q99M85 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Scrt1Q99M85 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Gm11960-201ENSMUST00000122068 925 ntBASIC9.59□□□□□ -0.87
Scrt1Q99M85 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Gm7627-201ENSMUST00000183205 999 ntBASIC9.59□□□□□ -0.87
Scrt1Q99M85 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC9.59□□□□□ -0.87
Scrt1Q99M85 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 AC152169.1-201ENSMUST00000223901 701 ntBASIC9.59□□□□□ -0.87
Scrt1Q99M85 AC121567.1-201ENSMUST00000227213 842 ntBASIC9.59□□□□□ -0.87
Scrt1Q99M85 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Rps3a2-201ENSMUST00000074245 792 ntBASIC9.59□□□□□ -0.87
Scrt1Q99M85 Rps3a3-201ENSMUST00000074680 795 ntBASIC9.59□□□□□ -0.87
Scrt1Q99M85 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
Scrt1Q99M85 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms