Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 Gm19058-201ENSMUST00000192135 598 ntBASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 Gm43103-201ENSMUST00000199021 802 ntBASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 AC132881.1-201ENSMUST00000223780 1062 ntBASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 AC161172.1-201ENSMUST00000227801 486 ntBASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 Gm5174-201ENSMUST00000171131 1423 ntBASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 Gm44664-201ENSMUST00000206841 1786 ntBASIC14.22□□□□□ -0.13
Ddx54Q8K4L0 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Gm42833-201ENSMUST00000196019 2124 ntBASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Gm33466-201ENSMUST00000199819 1689 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 AC132833.1-202ENSMUST00000228875 1690 ntBASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Gm22661-201ENSMUST00000104192 132 ntBASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Gm12106-201ENSMUST00000116006 1200 ntBASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Gm12377-201ENSMUST00000118656 252 ntBASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 4933439K11Rik-202ENSMUST00000140307 941 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Gm18182-201ENSMUST00000191380 1251 ntBASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Gm37819-201ENSMUST00000194626 1065 ntBASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Gm44460-201ENSMUST00000196179 129 ntBASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Gm43667-201ENSMUST00000198616 1095 ntBASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Gm30301-201ENSMUST00000199474 652 ntTSL 5 BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Gm9515-201ENSMUST00000200276 647 ntBASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Gm3889-201ENSMUST00000212467 612 ntBASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 CT025679.1-201ENSMUST00000227106 449 ntBASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 AC114585.2-201ENSMUST00000227693 486 ntBASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 AC122459.4-201ENSMUST00000228654 551 ntBASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Gm38227-201ENSMUST00000193036 1602 ntBASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx54Q8K4L0 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ddx54Q8K4L0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ddx54Q8K4L0 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC14.21□□□□□ -0.14
Ddx54Q8K4L0 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.21□□□□□ -0.14
Ddx54Q8K4L0 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
Ddx54Q8K4L0 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC14.21□□□□□ -0.14
Ddx54Q8K4L0 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC14.21□□□□□ -0.14
Ddx54Q8K4L0 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ddx54Q8K4L0 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ddx54Q8K4L0 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ddx54Q8K4L0 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC14.2□□□□□ -0.14
Ddx54Q8K4L0 Gm37860-201ENSMUST00000195380 1034 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms