Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Gm42521-201ENSMUST00000199190 2040 ntBASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Gm24066-201ENSMUST00000104515 131 ntBASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Gm24161-201ENSMUST00000104592 130 ntBASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Gm28391-201ENSMUST00000185202 379 ntBASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Gm29528-201ENSMUST00000186699 379 ntBASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Gm29526-201ENSMUST00000187217 379 ntBASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Gm8268-201ENSMUST00000209683 458 ntBASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 AC154461.3-201ENSMUST00000224831 573 ntBASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Gm5292-201ENSMUST00000073317 580 ntBASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Gm26440-201ENSMUST00000082591 129 ntBASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trnp1Q80ZI1 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Gm13215-201ENSMUST00000117559 472 ntBASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Gm25154-201ENSMUST00000157123 119 ntBASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Gm3889-201ENSMUST00000212467 612 ntBASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 AC166061.1-201ENSMUST00000225163 1138 ntBASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 AC123061.1-201ENSMUST00000228021 999 ntBASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trnp1Q80ZI1 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trnp1Q80ZI1 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trnp1Q80ZI1 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.21□□□□□ -0.46
Trnp1Q80ZI1 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trnp1Q80ZI1 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trnp1Q80ZI1 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Trnp1Q80ZI1 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trnp1Q80ZI1 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trnp1Q80ZI1 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trnp1Q80ZI1 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trnp1Q80ZI1 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trnp1Q80ZI1 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trnp1Q80ZI1 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trnp1Q80ZI1 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.2□□□□□ -0.46
Trnp1Q80ZI1 Gm37582-201ENSMUST00000192953 1409 ntBASIC12.2□□□□□ -0.46
Trnp1Q80ZI1 AC116596.1-201ENSMUST00000228112 1762 ntBASIC12.2□□□□□ -0.46
Trnp1Q80ZI1 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trnp1Q80ZI1 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trnp1Q80ZI1 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trnp1Q80ZI1 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trnp1Q80ZI1 AC158777.1-201ENSMUST00000226216 1724 ntBASIC12.2□□□□□ -0.46
Trnp1Q80ZI1 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trnp1Q80ZI1 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trnp1Q80ZI1 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trnp1Q80ZI1 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trnp1Q80ZI1 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trnp1Q80ZI1 Gm16518-201ENSMUST00000117960 508 ntBASIC12.2□□□□□ -0.46
Trnp1Q80ZI1 Gm13758-201ENSMUST00000118699 743 ntBASIC12.2□□□□□ -0.46
Trnp1Q80ZI1 Gm16480-201ENSMUST00000120439 832 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms