Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Gm17917-201ENSMUST00000218561 953 ntBASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh19Q80TF3 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Gm23612-201ENSMUST00000103823 110 ntBASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Gm14592-201ENSMUST00000117201 560 ntBASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Gm17070-201ENSMUST00000170463 784 ntBASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Gm25951-201ENSMUST00000175330 64 ntBASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Gm26272-201ENSMUST00000179241 132 ntBASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Gm23576-201ENSMUST00000179918 110 ntBASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Gm34379-201ENSMUST00000195036 290 ntBASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Gm18829-201ENSMUST00000188150 1622 ntBASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Gm6641-201ENSMUST00000196100 1315 ntBASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Gm42535-201ENSMUST00000197312 1399 ntBASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh19Q80TF3 AC090962.2-201ENSMUST00000225064 1801 ntBASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh19Q80TF3 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms