Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Ccser2-203ENSMUST00000182042 1420 ntTSL 5 BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Gm45663-201ENSMUST00000210429 1632 ntBASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Gm5766-202ENSMUST00000161633 799 ntBASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Gm22616-201ENSMUST00000179783 100 ntBASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Gm19798-201ENSMUST00000201502 457 ntBASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Gm44388-201ENSMUST00000204350 258 ntBASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 AC164978.2-201ENSMUST00000226645 857 ntBASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 AC141884.2-201ENSMUST00000228811 775 ntBASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Gm5766-201ENSMUST00000160520 1977 ntBASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3b2Q3UJB0 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sf3b2Q3UJB0 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Sf3b2Q3UJB0 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sf3b2Q3UJB0 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Sf3b2Q3UJB0 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sf3b2Q3UJB0 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sf3b2Q3UJB0 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sf3b2Q3UJB0 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC14.08□□□□□ -0.15
Sf3b2Q3UJB0 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Gm45719-201ENSMUST00000207954 1662 ntBASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Gm7190-201ENSMUST00000118669 1452 ntBASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Btrc-209ENSMUST00000224478 2194 ntBASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 D730045A05Rik-201ENSMUST00000159260 1269 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Gm18182-201ENSMUST00000191380 1251 ntBASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Gm4866-201ENSMUST00000197408 589 ntBASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Gm19090-201ENSMUST00000218187 774 ntBASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 CT009713.2-201ENSMUST00000225532 1149 ntBASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 AC102327.1-201ENSMUST00000226389 742 ntBASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Rgr-203ENSMUST00000225070 4704 ntBASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Gm38034-201ENSMUST00000193915 2069 ntBASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3b2Q3UJB0 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms