Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm10639-202ENSMUST00000121273 873 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gm12338-201ENSMUST00000122170 192 ntBASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gm14010-201ENSMUST00000131961 374 ntTSL 2 BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gm16329-201ENSMUST00000148174 371 ntBASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gm7160-201ENSMUST00000185535 471 ntTSL 2 BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 1700084F23Rik-201ENSMUST00000186662 1044 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Ang2-202ENSMUST00000228835 896 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Allc-201ENSMUST00000020965 1500 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Gm5910-201ENSMUST00000211819 1746 ntBASIC10□□□□□ -0.81
Spg11Q3UHA3 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Plekha5-206ENSMUST00000203774 1912 ntTSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Spg11Q3UHA3 Gm22481-201ENSMUST00000122562 192 ntBASIC10□□□□□ -0.81
Spg11Q3UHA3 Mir1893-201ENSMUST00000122565 83 ntBASIC10□□□□□ -0.81
Spg11Q3UHA3 Pip5k1bos-201ENSMUST00000126936 684 ntTSL 3 BASIC10□□□□□ -0.81
Spg11Q3UHA3 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC10□□□□□ -0.81
Spg11Q3UHA3 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 5031425E22Rik-203ENSMUST00000188328 828 ntTSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Spata45-202ENSMUST00000192151 443 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Spg11Q3UHA3 Gm6426-201ENSMUST00000209048 854 ntBASIC10□□□□□ -0.81
Spg11Q3UHA3 AC140393.4-201ENSMUST00000226994 765 ntBASIC10□□□□□ -0.81
Spg11Q3UHA3 AC140406.3-201ENSMUST00000227619 478 ntBASIC10□□□□□ -0.81
Spg11Q3UHA3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Spg11Q3UHA3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10□□□□□ -0.81
Spg11Q3UHA3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Spg11Q3UHA3 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10□□□□□ -0.81
Spg11Q3UHA3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10□□□□□ -0.81
Spg11Q3UHA3 1700010N08Rik-202ENSMUST00000188166 1323 ntTSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Gm4865-201ENSMUST00000196284 1309 ntBASIC10□□□□□ -0.81
Spg11Q3UHA3 Anapc15-203ENSMUST00000098237 1328 ntTSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 AC187103.1-202ENSMUST00000223904 1536 ntBASIC10□□□□□ -0.81
Spg11Q3UHA3 Gm7841-201ENSMUST00000122108 1629 ntBASIC10□□□□□ -0.81
Spg11Q3UHA3 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10□□□□□ -0.81
Spg11Q3UHA3 Gm12950-201ENSMUST00000121683 417 ntBASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Gm14323-201ENSMUST00000122418 627 ntBASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Gm43066-201ENSMUST00000199589 1260 ntBASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Tcstv3-202ENSMUST00000223967 779 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 AC170810.2-201ENSMUST00000228384 1232 ntBASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Gm42815-201ENSMUST00000198787 1470 ntBASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Gm6682-201ENSMUST00000169666 1346 ntBASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Gm24352-201ENSMUST00000158966 125 ntBASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Gm24368-201ENSMUST00000175388 106 ntBASIC9.99□□□□□ -0.81
Spg11Q3UHA3 5730420D15Rik-201ENSMUST00000181781 1182 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Gm34780-201ENSMUST00000193896 949 ntBASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Lgals9-201ENSMUST00000073001 1074 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Spg11Q3UHA3 Gm11427-201ENSMUST00000117952 1696 ntBASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms