Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Wdr12-203ENSMUST00000122038 2850 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Rps28P62858 Gm44652-201ENSMUST00000208648 2854 ntBASIC6.15□□□□□ -1.43
Rps28P62858 Gm44095-201ENSMUST00000204631 1931 ntBASIC6.15□□□□□ -1.43
Rps28P62858 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Rps28P62858 Gm32335-201ENSMUST00000216896 2948 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Rps28P62858 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Rps28P62858 Gm3455-201ENSMUST00000204812 1954 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Rps28P62858 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Rps28P62858 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Rps28P62858 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Rps28P62858 Zeb2-215ENSMUST00000200844 4064 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Rps28P62858 Snx25-207ENSMUST00000170416 3067 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Rps28P62858 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Stk26-201ENSMUST00000033444 3639 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Rps28P62858 Nol11-201ENSMUST00000018577 3158 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Hnrnpk-205ENSMUST00000176207 2653 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Gm44907-201ENSMUST00000207423 1633 ntBASIC6.14□□□□□ -1.43
Rps28P62858 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Nox1-202ENSMUST00000113275 1694 ntTSL 5 BASIC6.14□□□□□ -1.43
Rps28P62858 Usp4-209ENSMUST00000194959 3436 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 C6-203ENSMUST00000162350 2874 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Rps28P62858 Olfr1424-202ENSMUST00000207681 1714 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Rps28P62858 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Gm10069-201ENSMUST00000144745 3694 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Ctnnd1-221ENSMUST00000111695 6344 ntTSL 5 BASIC6.14□□□□□ -1.43
Rps28P62858 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC6.14□□□□□ -1.43
Rps28P62858 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Rps28P62858 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Rps28P62858 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Rps28P62858 Gm14862-201ENSMUST00000115553 870 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC6.14□□□□□ -1.43
Rps28P62858 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC6.14□□□□□ -1.43
Rps28P62858 Gm6447-201ENSMUST00000118905 835 ntBASIC6.14□□□□□ -1.43
Rps28P62858 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC6.14□□□□□ -1.43
Rps28P62858 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC6.14□□□□□ -1.43
Rps28P62858 Gm17068-201ENSMUST00000163135 980 ntBASIC6.14□□□□□ -1.43
Rps28P62858 Trmt13-210ENSMUST00000198454 880 ntBASIC6.14□□□□□ -1.43
Rps28P62858 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC6.14□□□□□ -1.43
Rps28P62858 Gm43480-201ENSMUST00000201201 416 ntBASIC6.14□□□□□ -1.43
Rps28P62858 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC6.14□□□□□ -1.43
Rps28P62858 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 1810014B01Rik-205ENSMUST00000218691 323 ntTSL 3 BASIC6.14□□□□□ -1.43
Rps28P62858 Timm23-208ENSMUST00000226683 750 ntBASIC6.14□□□□□ -1.43
Rps28P62858 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Rps28P62858 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Mir30c-1-201ENSMUST00000083556 89 ntBASIC6.14□□□□□ -1.43
Rps28P62858 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Rps28P62858 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Esrrg-201ENSMUST00000027906 5293 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC6.14□□□□□ -1.43
Rps28P62858 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC6.14□□□□□ -1.43
Rps28P62858 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Aar2-201ENSMUST00000029158 3427 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Gm15894-201ENSMUST00000162828 2067 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Rps28P62858 Ddx46-203ENSMUST00000223736 5612 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
Rps28P62858 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Bach2-207ENSMUST00000171600 8493 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Gm4864-201ENSMUST00000219894 1461 ntBASIC6.14□□□□□ -1.43
Rps28P62858 4930433I11Rik-202ENSMUST00000206529 2963 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Rps28P62858 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Rps28P62858 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Tmem181b-ps-202ENSMUST00000180035 2426 ntTSL 5 BASIC6.14□□□□□ -1.43
Rps28P62858 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Rps28P62858 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rps28P62858 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC6.14□□□□□ -1.43
Rps28P62858 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC6.14□□□□□ -1.43
Rps28P62858 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Rps28P62858 Fmr1os-201ENSMUST00000181533 2743 ntTSL 2 BASIC6.13□□□□□ -1.43
Rps28P62858 Gm10644-201ENSMUST00000098595 2798 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Rps28P62858 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Rps28P62858 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Rps28P62858 Plekha5-206ENSMUST00000203774 1912 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Rps28P62858 Mcf2l-204ENSMUST00000110867 3864 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Rps28P62858 Cntnap4-202ENSMUST00000118171 4860 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
Rps28P62858 Myo7a-202ENSMUST00000107122 6867 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Rps28P62858 Ttc16-201ENSMUST00000066478 2979 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Rps28P62858 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Rps28P62858 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms