Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm28324-201ENSMUST00000187913 264 ntBASIC10.3□□□□□ -0.76
Nup43P59235 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC10.3□□□□□ -0.76
Nup43P59235 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC10.3□□□□□ -0.76
Nup43P59235 Gm45219-201ENSMUST00000205602 465 ntBASIC10.3□□□□□ -0.76
Nup43P59235 Gm7082-201ENSMUST00000209880 969 ntBASIC10.3□□□□□ -0.76
Nup43P59235 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC10.3□□□□□ -0.76
Nup43P59235 Gm8255-201ENSMUST00000218693 305 ntBASIC10.3□□□□□ -0.76
Nup43P59235 BX649293.1-201ENSMUST00000227437 631 ntBASIC10.3□□□□□ -0.76
Nup43P59235 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.3□□□□□ -0.76
Nup43P59235 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nup43P59235 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Nup43P59235 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Nup43P59235 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.29□□□□□ -0.76
Nup43P59235 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.29□□□□□ -0.76
Nup43P59235 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Nup43P59235 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Nup43P59235 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Nup43P59235 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Nup43P59235 Gm11380-201ENSMUST00000118067 560 ntBASIC10.29□□□□□ -0.76
Nup43P59235 Gm5944-201ENSMUST00000118182 1001 ntBASIC10.29□□□□□ -0.76
Nup43P59235 Gm14497-201ENSMUST00000119537 580 ntBASIC10.29□□□□□ -0.76
Nup43P59235 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC10.29□□□□□ -0.76
Nup43P59235 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Gm5210-201ENSMUST00000182150 1010 ntBASIC10.29□□□□□ -0.76
Nup43P59235 Gm27438-201ENSMUST00000183480 110 ntBASIC10.29□□□□□ -0.76
Nup43P59235 Gm27441-201ENSMUST00000185000 105 ntBASIC10.29□□□□□ -0.76
Nup43P59235 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC10.29□□□□□ -0.76
Nup43P59235 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC10.29□□□□□ -0.76
Nup43P59235 Gm28746-201ENSMUST00000187453 380 ntBASIC10.29□□□□□ -0.76
Nup43P59235 Gm18776-201ENSMUST00000188833 654 ntBASIC10.29□□□□□ -0.76
Nup43P59235 Gm28833-201ENSMUST00000189671 559 ntBASIC10.29□□□□□ -0.76
Nup43P59235 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC10.29□□□□□ -0.76
Nup43P59235 Gm7880-201ENSMUST00000203748 871 ntBASIC10.29□□□□□ -0.76
Nup43P59235 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC10.29□□□□□ -0.76
Nup43P59235 Gm7600-201ENSMUST00000209657 785 ntBASIC10.29□□□□□ -0.76
Nup43P59235 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC10.29□□□□□ -0.76
Nup43P59235 AC132901.1-201ENSMUST00000224345 508 ntBASIC10.29□□□□□ -0.76
Nup43P59235 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Nup43P59235 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Nup43P59235 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Nup43P59235 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Nup43P59235 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Nup43P59235 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.29□□□□□ -0.76
Nup43P59235 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.29□□□□□ -0.76
Nup43P59235 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC10.29□□□□□ -0.76
Nup43P59235 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.29□□□□□ -0.76
Nup43P59235 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Nup43P59235 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Nup43P59235 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup43P59235 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
Nup43P59235 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms