Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm12613-201ENSMUST00000180323 382 ntBASIC9.53□□□□□ -0.88
Upk2P38575 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Gm44814-201ENSMUST00000207018 434 ntBASIC9.53□□□□□ -0.88
Upk2P38575 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC9.53□□□□□ -0.88
Upk2P38575 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC9.53□□□□□ -0.88
Upk2P38575 AC154435.1-201ENSMUST00000223938 959 ntBASIC9.53□□□□□ -0.88
Upk2P38575 AC154305.2-201ENSMUST00000225813 901 ntBASIC9.53□□□□□ -0.88
Upk2P38575 AC135469.1-201ENSMUST00000225984 772 ntBASIC9.53□□□□□ -0.88
Upk2P38575 AC165154.1-201ENSMUST00000226661 340 ntBASIC9.53□□□□□ -0.88
Upk2P38575 AC102368.1-201ENSMUST00000227161 892 ntBASIC9.53□□□□□ -0.88
Upk2P38575 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC9.53□□□□□ -0.88
Upk2P38575 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Gm44106-201ENSMUST00000203153 1599 ntBASIC9.53□□□□□ -0.88
Upk2P38575 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Upk2P38575 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Upk2P38575 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Gm18294-201ENSMUST00000176980 1748 ntBASIC9.53□□□□□ -0.88
Upk2P38575 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Upk2P38575 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.53□□□□□ -0.88
Upk2P38575 Gm13384-201ENSMUST00000117166 1344 ntBASIC9.53□□□□□ -0.88
Upk2P38575 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Upk2P38575 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.53□□□□□ -0.88
Upk2P38575 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Upk2P38575 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Upk2P38575 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Upk2P38575 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Upk2P38575 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Upk2P38575 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Upk2P38575 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Upk2P38575 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Upk2P38575 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Upk2P38575 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Upk2P38575 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Upk2P38575 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Upk2P38575 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Upk2P38575 Mir453-201ENSMUST00000104732 82 ntBASIC9.52□□□□□ -0.89
Upk2P38575 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC9.52□□□□□ -0.89
Upk2P38575 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Upk2P38575 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Upk2P38575 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC9.52□□□□□ -0.89
Upk2P38575 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC9.52□□□□□ -0.89
Upk2P38575 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Upk2P38575 Gm21142-201ENSMUST00000179999 2604 ntBASIC9.52□□□□□ -0.89
Upk2P38575 Gm4812-201ENSMUST00000182847 993 ntBASIC9.52□□□□□ -0.89
Upk2P38575 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Upk2P38575 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Upk2P38575 Gm7880-201ENSMUST00000203748 871 ntBASIC9.52□□□□□ -0.89
Upk2P38575 Gm44158-201ENSMUST00000203881 505 ntBASIC9.52□□□□□ -0.89
Upk2P38575 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC9.52□□□□□ -0.89
Upk2P38575 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Upk2P38575 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Upk2P38575 AC136376.2-201ENSMUST00000228819 490 ntBASIC9.52□□□□□ -0.89
Upk2P38575 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Upk2P38575 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Upk2P38575 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Upk2P38575 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Upk2P38575 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Upk2P38575 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Upk2P38575 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Upk2P38575 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Upk2P38575 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Upk2P38575 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Upk2P38575 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Upk2P38575 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Upk2P38575 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Upk2P38575 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Upk2P38575 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Upk2P38575 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Upk2P38575 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Upk2P38575 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Upk2P38575 Gm38344-201ENSMUST00000195306 1353 ntBASIC9.51□□□□□ -0.89
Upk2P38575 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.51□□□□□ -0.89
Upk2P38575 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Upk2P38575 AC154220.1-201ENSMUST00000225033 1705 ntBASIC9.51□□□□□ -0.89
Upk2P38575 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Upk2P38575 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Upk2P38575 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Upk2P38575 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC9.51□□□□□ -0.89
Upk2P38575 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Upk2P38575 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Upk2P38575 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Upk2P38575 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Upk2P38575 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Upk2P38575 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Upk2P38575 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms