Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Gm11411-201ENSMUST00000117951 719 ntBASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Gm13117-201ENSMUST00000120894 691 ntBASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Gm37986-201ENSMUST00000193285 383 ntBASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Gm18466-201ENSMUST00000209147 499 ntBASIC9.38□□□□□ -0.91
Igh-VJ558P01758 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 AC164429.1-201ENSMUST00000224210 518 ntBASIC9.38□□□□□ -0.91
Igh-VJ558P01758 AC135469.1-201ENSMUST00000225984 772 ntBASIC9.38□□□□□ -0.91
Igh-VJ558P01758 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Gm29101-201ENSMUST00000188329 1471 ntBASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Igh-VJ558P01758 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Gm37516-201ENSMUST00000192593 1954 ntBASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Gm42833-201ENSMUST00000196019 2124 ntBASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Gm15131-201ENSMUST00000119124 595 ntBASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Gm12516-201ENSMUST00000120819 385 ntBASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Gm8285-201ENSMUST00000208293 759 ntBASIC9.37□□□□□ -0.91
Igh-VJ558P01758 AC165154.1-201ENSMUST00000226661 340 ntBASIC9.37□□□□□ -0.91
Igh-VJ558P01758 AC137950.2-201ENSMUST00000227127 1089 ntBASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Igh-VJ558P01758 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms