Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.42□□□□□ -0.74
Ube4bQ9ES00 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Ube4bQ9ES00 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Ube4bQ9ES00 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ube4bQ9ES00 CT025639.2-202ENSMUST00000225298 1630 ntBASIC10.42□□□□□ -0.74
Ube4bQ9ES00 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube4bQ9ES00 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ube4bQ9ES00 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube4bQ9ES00 Platr9-202ENSMUST00000149572 1556 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ube4bQ9ES00 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.42□□□□□ -0.74
Ube4bQ9ES00 Gfap-202ENSMUST00000077902 2600 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ube4bQ9ES00 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube4bQ9ES00 Gm28138-201ENSMUST00000186250 2167 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ube4bQ9ES00 Gm29270-201ENSMUST00000188071 2167 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ube4bQ9ES00 Gm29392-201ENSMUST00000189429 2167 ntTSL 5 BASIC10.42□□□□□ -0.74
Ube4bQ9ES00 Gm29252-201ENSMUST00000189869 2167 ntTSL 5 BASIC10.42□□□□□ -0.74
Ube4bQ9ES00 Gm29305-201ENSMUST00000191054 2167 ntTSL 5 BASIC10.42□□□□□ -0.74
Ube4bQ9ES00 Stat6-201ENSMUST00000092074 3775 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube4bQ9ES00 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.42□□□□□ -0.74
Ube4bQ9ES00 Zfp60-208ENSMUST00000167955 2115 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Ube4bQ9ES00 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube4bQ9ES00 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC10.42□□□□□ -0.74
Ube4bQ9ES00 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC10.42□□□□□ -0.74
Ube4bQ9ES00 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC10.42□□□□□ -0.74
Ube4bQ9ES00 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Fblim1-203ENSMUST00000105785 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Glyctk-201ENSMUST00000036382 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 C230057M02Rik-201ENSMUST00000212334 3306 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Prim1-201ENSMUST00000026461 1583 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Gm22323-201ENSMUST00000103832 109 ntBASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Gm26286-201ENSMUST00000104166 134 ntBASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Gm27320-201ENSMUST00000184892 109 ntBASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Gm7783-201ENSMUST00000204795 781 ntBASIC10.41□□□□□ -0.74
Ube4bQ9ES00 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Prdx6-202ENSMUST00000071718 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Pklr-202ENSMUST00000107482 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 2900060N12Rik-201ENSMUST00000221412 3721 ntBASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Cep95-202ENSMUST00000103068 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Zbtb8b-202ENSMUST00000106046 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Kir3dl2-201ENSMUST00000072125 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Gm13437-201ENSMUST00000122434 1981 ntBASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Ube4bQ9ES00 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 9130221F21Rik-201ENSMUST00000206867 2631 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Fam171a1-202ENSMUST00000072955 3364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Gm22133-201ENSMUST00000102082 109 ntBASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Gm42859-201ENSMUST00000199572 193 ntBASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Gm45331-201ENSMUST00000209868 554 ntBASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ube4bQ9ES00 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms