Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Gm11952-201ENSMUST00000121172 821 ntBASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Gm26461-201ENSMUST00000175064 290 ntBASIC11.31□□□□□ -0.6
Cpne8Q9DC53 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Gm45770-201ENSMUST00000212105 616 ntBASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpne8Q9DC53 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Gm25766-201ENSMUST00000104101 131 ntBASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Gm11380-201ENSMUST00000118067 560 ntBASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Gm16570-201ENSMUST00000161951 436 ntBASIC11.3□□□□□ -0.6
Cpne8Q9DC53 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Gm7467-201ENSMUST00000185173 652 ntBASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Gm37852-201ENSMUST00000193027 350 ntBASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.3□□□□□ -0.6
Cpne8Q9DC53 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.3□□□□□ -0.6
Cpne8Q9DC53 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Phtf1os-201ENSMUST00000160110 4046 ntBASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Gm44888-201ENSMUST00000209119 2541 ntBASIC11.3□□□□□ -0.6
Cpne8Q9DC53 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cpne8Q9DC53 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cpne8Q9DC53 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 121.3 ms