Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Gm4917-201ENSMUST00000121452 650 ntBASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Gm10169-201ENSMUST00000121822 348 ntBASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Gm19246-201ENSMUST00000173599 255 ntBASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Gm8531-201ENSMUST00000188319 893 ntBASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdhga4Q91XY4 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Gm12899-201ENSMUST00000120565 551 ntBASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Mir1956-201ENSMUST00000157748 65 ntBASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Gm43163-201ENSMUST00000196571 442 ntBASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Gm18561-201ENSMUST00000206027 804 ntBASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Gm10463-202ENSMUST00000195772 2889 ntBASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga4Q91XY4 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Gm14398-201ENSMUST00000117287 1073 ntBASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Gm12218-201ENSMUST00000117666 399 ntBASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms