Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga6Q91XY2 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdhga6Q91XY2 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Pcdhga6Q91XY2 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdhga6Q91XY2 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdhga6Q91XY2 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Pcdhga6Q91XY2 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdhga6Q91XY2 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.96□□□□□ -0.66
Pcdhga6Q91XY2 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdhga6Q91XY2 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdhga6Q91XY2 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdhga6Q91XY2 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdhga6Q91XY2 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Gm13827-201ENSMUST00000148801 372 ntBASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Gm9369-201ENSMUST00000196009 733 ntBASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Gm45310-201ENSMUST00000210436 275 ntBASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 AC154759.1-201ENSMUST00000224137 1159 ntBASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 AC115304.2-201ENSMUST00000226399 332 ntBASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 BC043934-202ENSMUST00000185694 2356 ntBASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga6Q91XY2 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Gm6024-201ENSMUST00000117850 1558 ntBASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Gm12461-201ENSMUST00000120231 1239 ntBASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Gm15136-201ENSMUST00000120552 533 ntBASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Gm4982-201ENSMUST00000160440 1098 ntBASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Gm5529-201ENSMUST00000165691 891 ntBASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Gm2345-201ENSMUST00000193451 589 ntBASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Gm43244-201ENSMUST00000196994 1285 ntBASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Gm43249-201ENSMUST00000200464 458 ntBASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC10.94□□□□□ -0.66
Pcdhga6Q91XY2 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms