Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nod1Q8BHB0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nod1Q8BHB0 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nod1Q8BHB0 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nod1Q8BHB0 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nod1Q8BHB0 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nod1Q8BHB0 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.5□□□□□ -0.57
Nod1Q8BHB0 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Gm42432-201ENSMUST00000197902 1617 ntBASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Gm37207-201ENSMUST00000194284 296 ntBASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Gm18042-201ENSMUST00000219887 790 ntBASIC11.49□□□□□ -0.57
Nod1Q8BHB0 AC105408.1-201ENSMUST00000227771 802 ntBASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Gm25514-201ENSMUST00000083860 135 ntBASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.49□□□□□ -0.57
Nod1Q8BHB0 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nod1Q8BHB0 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Gm17796-201ENSMUST00000189015 1213 ntBASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Gm7238-201ENSMUST00000206467 973 ntBASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 AC132446.1-201ENSMUST00000222655 226 ntBASIC11.48□□□□□ -0.57
Nod1Q8BHB0 CT025603.1-201ENSMUST00000224040 448 ntBASIC11.48□□□□□ -0.57
Nod1Q8BHB0 AC138716.2-201ENSMUST00000226670 1016 ntBASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Nod1Q8BHB0 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nod1Q8BHB0 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms