Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Gm15782-201ENSMUST00000121073 445 ntBASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Mir7032-201ENSMUST00000185154 79 ntBASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Gm17825-201ENSMUST00000206836 794 ntBASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdp1Q7TSG2 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Gm8111-201ENSMUST00000117659 987 ntBASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Gm15566-201ENSMUST00000121130 590 ntBASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Gm7666-201ENSMUST00000146631 819 ntBASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Gm27441-201ENSMUST00000185000 105 ntBASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Gm7467-201ENSMUST00000185173 652 ntBASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Gm3508-201ENSMUST00000186012 792 ntBASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Gm9540-201ENSMUST00000188230 478 ntBASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Gm37301-201ENSMUST00000195412 568 ntBASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Gm43058-201ENSMUST00000197645 625 ntBASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Gm45118-201ENSMUST00000208928 825 ntBASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdp1Q7TSG2 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ctdp1Q7TSG2 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdp1Q7TSG2 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdp1Q7TSG2 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdp1Q7TSG2 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdp1Q7TSG2 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdp1Q7TSG2 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdp1Q7TSG2 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdp1Q7TSG2 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdp1Q7TSG2 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.85□□□□□ -0.51
Ctdp1Q7TSG2 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdp1Q7TSG2 Gm23061-201ENSMUST00000102348 116 ntBASIC11.85□□□□□ -0.51
Ctdp1Q7TSG2 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdp1Q7TSG2 Gm14193-201ENSMUST00000105067 153 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms