Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28047Q3US59 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC12.39□□□□□ -0.43
Gm28047Q3US59 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28047Q3US59 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28047Q3US59 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Gm25766-201ENSMUST00000104101 131 ntBASIC12.38□□□□□ -0.43
Gm28047Q3US59 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Gm12337-201ENSMUST00000119634 400 ntBASIC12.38□□□□□ -0.43
Gm28047Q3US59 Gm5244-201ENSMUST00000164001 339 ntBASIC12.38□□□□□ -0.43
Gm28047Q3US59 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.38□□□□□ -0.43
Gm28047Q3US59 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.38□□□□□ -0.43
Gm28047Q3US59 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.38□□□□□ -0.43
Gm28047Q3US59 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Gm45124-201ENSMUST00000206723 2755 ntBASIC12.38□□□□□ -0.43
Gm28047Q3US59 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.38□□□□□ -0.43
Gm28047Q3US59 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28047Q3US59 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.37□□□□□ -0.43
Gm28047Q3US59 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Gm38312-201ENSMUST00000195426 1746 ntBASIC12.37□□□□□ -0.43
Gm28047Q3US59 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Gm17391-201ENSMUST00000171036 126 ntBASIC12.37□□□□□ -0.43
Gm28047Q3US59 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.37□□□□□ -0.43
Gm28047Q3US59 Gm37720-201ENSMUST00000195497 1241 ntBASIC12.37□□□□□ -0.43
Gm28047Q3US59 Gm43671-201ENSMUST00000200422 433 ntBASIC12.37□□□□□ -0.43
Gm28047Q3US59 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.37□□□□□ -0.43
Gm28047Q3US59 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.37□□□□□ -0.43
Gm28047Q3US59 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm28047Q3US59 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.37□□□□□ -0.43
Gm28047Q3US59 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Gm43052-201ENSMUST00000201451 1628 ntBASIC12.37□□□□□ -0.43
Gm28047Q3US59 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28047Q3US59 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Gm11735-201ENSMUST00000106377 1581 ntBASIC12.36□□□□□ -0.43
Gm28047Q3US59 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms