Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 1700010K24Rik-201ENSMUST00000125852 226 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Gm12962-201ENSMUST00000138697 580 ntTSL 2 BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Gm17250-201ENSMUST00000180494 1010 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Gm26639-201ENSMUST00000181426 491 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Zfp422-ps-201ENSMUST00000182230 706 ntBASIC10.02□□□□□ -0.81
Spg11Q3UHA3 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Ccdc153-206ENSMUST00000216632 800 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Gm40578-202ENSMUST00000221429 920 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 AC140426.1-201ENSMUST00000227933 459 ntBASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 AC153566.1-201ENSMUST00000216441 2057 ntBASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Rpsa-ps11-201ENSMUST00000118446 889 ntBASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Gm11800-201ENSMUST00000120050 579 ntBASIC10.02□□□□□ -0.81
Spg11Q3UHA3 1700019E08Rik-201ENSMUST00000134308 424 ntTSL 5 BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Gm20945-201ENSMUST00000178122 1145 ntBASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Gm28676-201ENSMUST00000188990 591 ntTSL 5 BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Gm30873-201ENSMUST00000207512 1222 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Gm18165-201ENSMUST00000217426 928 ntBASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Spg11Q3UHA3 Gm32540-201ENSMUST00000207174 1872 ntTSL 5 BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gm15535-202ENSMUST00000148478 1519 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gm13631-201ENSMUST00000140978 654 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gm23220-201ENSMUST00000158115 137 ntBASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Mir6909-201ENSMUST00000184212 62 ntBASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gm5150-202ENSMUST00000194367 1212 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gm8704-201ENSMUST00000197181 435 ntBASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gm43551-201ENSMUST00000197221 440 ntBASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gm3922-201ENSMUST00000200519 435 ntBASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gm17768-201ENSMUST00000201257 378 ntTSL 5 BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gm45454-201ENSMUST00000211484 455 ntBASIC10.01□□□□□ -0.81
Spg11Q3UHA3 CT025642.1-201ENSMUST00000224734 1219 ntBASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 4930455D15Rik-201ENSMUST00000181632 1616 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Slamf9-201ENSMUST00000027830 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gm12452-201ENSMUST00000117128 331 ntBASIC10.01□□□□□ -0.81
Spg11Q3UHA3 Gm7158-201ENSMUST00000120079 903 ntBASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms