Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.55□□□□□ -0.56
Trim43aQ3TL54 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Gm9211-201ENSMUST00000182882 975 ntBASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Gm8574-201ENSMUST00000203207 924 ntBASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Gm1821-202ENSMUST00000227415 750 ntBASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Ntng1-201ENSMUST00000051253 327 ntBASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim43aQ3TL54 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Gm21817-201ENSMUST00000178584 2583 ntBASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Gm23251-201ENSMUST00000103773 110 ntBASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Gm22711-201ENSMUST00000116890 133 ntBASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.54□□□□□ -0.56
Trim43aQ3TL54 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Gm13809-201ENSMUST00000117921 597 ntBASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Gm8302-201ENSMUST00000119217 852 ntBASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Gm25492-201ENSMUST00000157383 129 ntBASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Gm5865-201ENSMUST00000198713 637 ntBASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim43aQ3TL54 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Phtf1os-201ENSMUST00000160110 4046 ntBASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Gm15432-201ENSMUST00000121106 195 ntBASIC11.53□□□□□ -0.56
Trim43aQ3TL54 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Gm20426-201ENSMUST00000173657 440 ntBASIC11.53□□□□□ -0.56
Trim43aQ3TL54 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Gm43186-201ENSMUST00000198130 824 ntBASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms