Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Smarcc1P97496 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC13.69□□□□□ -0.22
Smarcc1P97496 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc1P97496 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc1P97496 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc1P97496 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Smarcc1P97496 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Smarcc1P97496 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc1P97496 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc1P97496 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc1P97496 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Smarcc1P97496 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc1P97496 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc1P97496 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Smarcc1P97496 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC13.68□□□□□ -0.22
Smarcc1P97496 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Smarcc1P97496 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Gm11540-201ENSMUST00000117457 780 ntBASIC13.68□□□□□ -0.22
Smarcc1P97496 Gm14148-201ENSMUST00000122433 1008 ntBASIC13.68□□□□□ -0.22
Smarcc1P97496 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Smarcc1P97496 Gm37597-201ENSMUST00000191853 382 ntBASIC13.68□□□□□ -0.22
Smarcc1P97496 Gm38007-201ENSMUST00000192187 313 ntBASIC13.68□□□□□ -0.22
Smarcc1P97496 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC13.68□□□□□ -0.22
Smarcc1P97496 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Ighv1-86-201ENSMUST00000200562 353 ntBASIC13.68□□□□□ -0.22
Smarcc1P97496 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Gm8162-201ENSMUST00000213951 665 ntBASIC13.68□□□□□ -0.22
Smarcc1P97496 Gm5040-201ENSMUST00000218609 800 ntBASIC13.68□□□□□ -0.22
Smarcc1P97496 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Gm4778-201ENSMUST00000098878 1098 ntBASIC13.68□□□□□ -0.22
Smarcc1P97496 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC13.68□□□□□ -0.22
Smarcc1P97496 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Gm10537-201ENSMUST00000192625 1698 ntBASIC13.68□□□□□ -0.22
Smarcc1P97496 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.68□□□□□ -0.22
Smarcc1P97496 Gm42971-201ENSMUST00000199228 2079 ntBASIC13.68□□□□□ -0.22
Smarcc1P97496 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Smarcc1P97496 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Smarcc1P97496 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcc1P97496 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC13.67□□□□□ -0.22
Smarcc1P97496 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Smarcc1P97496 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 Gm8968-201ENSMUST00000199133 1303 ntBASIC13.67□□□□□ -0.22
Smarcc1P97496 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 Bcl2-202ENSMUST00000189999 2841 ntBASIC13.67□□□□□ -0.22
Smarcc1P97496 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC13.67□□□□□ -0.22
Smarcc1P97496 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 Gm9574-201ENSMUST00000173127 845 ntBASIC13.67□□□□□ -0.22
Smarcc1P97496 Gm5873-201ENSMUST00000177157 1066 ntBASIC13.67□□□□□ -0.22
Smarcc1P97496 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC13.67□□□□□ -0.22
Smarcc1P97496 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC13.67□□□□□ -0.22
Smarcc1P97496 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC13.67□□□□□ -0.22
Smarcc1P97496 Gm42687-201ENSMUST00000199075 164 ntBASIC13.67□□□□□ -0.22
Smarcc1P97496 Saa-ps-201ENSMUST00000211148 320 ntBASIC13.67□□□□□ -0.22
Smarcc1P97496 AC132384.2-201ENSMUST00000218018 526 ntBASIC13.67□□□□□ -0.22
Smarcc1P97496 AC154806.7-201ENSMUST00000227998 202 ntBASIC13.67□□□□□ -0.22
Smarcc1P97496 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Smarcc1P97496 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Smarcc1P97496 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.67□□□□□ -0.22
Smarcc1P97496 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Smarcc1P97496 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Smarcc1P97496 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcc1P97496 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Smarcc1P97496 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms