Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PrkcbP68404 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
PrkcbP68404 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PrkcbP68404 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
PrkcbP68404 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.77□□□□□ -0.52
PrkcbP68404 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.52
PrkcbP68404 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC11.77□□□□□ -0.52
PrkcbP68404 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.77□□□□□ -0.52
PrkcbP68404 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.77□□□□□ -0.52
PrkcbP68404 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.77□□□□□ -0.52
PrkcbP68404 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PrkcbP68404 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
PrkcbP68404 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
PrkcbP68404 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
PrkcbP68404 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
PrkcbP68404 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
PrkcbP68404 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
PrkcbP68404 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
PrkcbP68404 Gm8684-201ENSMUST00000195078 1564 ntBASIC11.77□□□□□ -0.53
PrkcbP68404 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Gm15003-201ENSMUST00000118884 446 ntBASIC11.77□□□□□ -0.53
PrkcbP68404 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
PrkcbP68404 Gm15620-201ENSMUST00000122949 270 ntBASIC11.77□□□□□ -0.53
PrkcbP68404 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
PrkcbP68404 Gm17070-201ENSMUST00000170463 784 ntBASIC11.77□□□□□ -0.53
PrkcbP68404 Gm26272-201ENSMUST00000179241 132 ntBASIC11.77□□□□□ -0.53
PrkcbP68404 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
PrkcbP68404 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
PrkcbP68404 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
PrkcbP68404 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.77□□□□□ -0.53
PrkcbP68404 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkcbP68404 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PrkcbP68404 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
PrkcbP68404 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
PrkcbP68404 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
PrkcbP68404 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
PrkcbP68404 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
PrkcbP68404 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
PrkcbP68404 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
PrkcbP68404 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC11.76□□□□□ -0.53
PrkcbP68404 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
PrkcbP68404 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
PrkcbP68404 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC11.76□□□□□ -0.53
PrkcbP68404 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
PrkcbP68404 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
PrkcbP68404 Gm23647-201ENSMUST00000175042 109 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 Rn5s-201ENSMUST00000177555 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s108-201ENSMUST00000177575 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s121-201ENSMUST00000177589 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s146-201ENSMUST00000177889 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 Gm22109-201ENSMUST00000177995 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 Gm22291-201ENSMUST00000178027 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s141-201ENSMUST00000178066 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 Gm23284-201ENSMUST00000178069 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s100-201ENSMUST00000178106 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s111-201ENSMUST00000178203 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s105-201ENSMUST00000178499 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s149-201ENSMUST00000178520 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s103-201ENSMUST00000178755 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s123-201ENSMUST00000178804 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s142-201ENSMUST00000178820 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s144-201ENSMUST00000178859 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s139-201ENSMUST00000178975 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s134-201ENSMUST00000178983 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s136-201ENSMUST00000179080 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 Gm25018-201ENSMUST00000179081 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s133-201ENSMUST00000179275 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s117-201ENSMUST00000179431 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 Gm25212-201ENSMUST00000179432 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s138-201ENSMUST00000179476 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s122-201ENSMUST00000179500 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s143-201ENSMUST00000179542 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 n-R5s107-201ENSMUST00000179704 119 ntBASIC11.76□□□□□ -0.53
PrkcbP68404 Gm26391-201ENSMUST00000179843 119 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms