Protein–RNA interactions for Protein: P58873

Rhbdl3, Rhomboid-related protein 3, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdl3P58873 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rhbdl3P58873 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Rhbdl3P58873 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rhbdl3P58873 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rhbdl3P58873 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rhbdl3P58873 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rhbdl3P58873 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC12.91□□□□□ -0.34
Rhbdl3P58873 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rhbdl3P58873 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rhbdl3P58873 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Gng5-ps-201ENSMUST00000120931 205 ntBASIC12.9□□□□□ -0.34
Rhbdl3P58873 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Gm15258-201ENSMUST00000153801 741 ntBASIC12.9□□□□□ -0.34
Rhbdl3P58873 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Gm18123-201ENSMUST00000210874 822 ntBASIC12.9□□□□□ -0.34
Rhbdl3P58873 Gm18122-201ENSMUST00000211390 904 ntBASIC12.9□□□□□ -0.34
Rhbdl3P58873 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC12.9□□□□□ -0.34
Rhbdl3P58873 AC161172.1-201ENSMUST00000227801 486 ntBASIC12.9□□□□□ -0.34
Rhbdl3P58873 AC154213.1-201ENSMUST00000228234 583 ntBASIC12.9□□□□□ -0.34
Rhbdl3P58873 AC164883.7-201ENSMUST00000228534 851 ntBASIC12.9□□□□□ -0.34
Rhbdl3P58873 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rhbdl3P58873 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Rhbdl3P58873 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Rhbdl3P58873 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.89□□□□□ -0.35
Rhbdl3P58873 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Gm3372-201ENSMUST00000198806 1792 ntBASIC12.89□□□□□ -0.35
Rhbdl3P58873 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Gm42971-201ENSMUST00000199228 2079 ntBASIC12.89□□□□□ -0.35
Rhbdl3P58873 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Rhbdl3P58873 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.89□□□□□ -0.35
Rhbdl3P58873 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Gm5510-201ENSMUST00000117826 486 ntBASIC12.89□□□□□ -0.35
Rhbdl3P58873 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC12.89□□□□□ -0.35
Rhbdl3P58873 Gm12570-201ENSMUST00000122047 1030 ntBASIC12.89□□□□□ -0.35
Rhbdl3P58873 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Gm6686-201ENSMUST00000178455 258 ntBASIC12.89□□□□□ -0.35
Rhbdl3P58873 Gm7539-201ENSMUST00000189789 630 ntBASIC12.89□□□□□ -0.35
Rhbdl3P58873 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Rhbdl3P58873 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Gm18466-201ENSMUST00000209147 499 ntBASIC12.89□□□□□ -0.35
Rhbdl3P58873 AC154759.1-201ENSMUST00000224137 1159 ntBASIC12.89□□□□□ -0.35
Rhbdl3P58873 CT010505.2-201ENSMUST00000227918 998 ntBASIC12.89□□□□□ -0.35
Rhbdl3P58873 Gm5278-201ENSMUST00000055957 552 ntBASIC12.89□□□□□ -0.35
Rhbdl3P58873 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Rps3a3-201ENSMUST00000074680 795 ntBASIC12.89□□□□□ -0.35
Rhbdl3P58873 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rhbdl3P58873 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms