Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC12.63□□□□□ -0.39
Pde6aP27664 Gm12795-201ENSMUST00000117594 539 ntBASIC12.63□□□□□ -0.39
Pde6aP27664 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6aP27664 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.63□□□□□ -0.39
Pde6aP27664 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6aP27664 Gm25830-201ENSMUST00000158923 132 ntBASIC12.63□□□□□ -0.39
Pde6aP27664 Gm17221-201ENSMUST00000163909 481 ntBASIC12.63□□□□□ -0.39
Pde6aP27664 Gm17073-201ENSMUST00000168069 556 ntBASIC12.63□□□□□ -0.39
Pde6aP27664 Gm24809-201ENSMUST00000175318 271 ntBASIC12.63□□□□□ -0.39
Pde6aP27664 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6aP27664 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Pde6aP27664 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.63□□□□□ -0.39
Pde6aP27664 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC12.63□□□□□ -0.39
Pde6aP27664 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6aP27664 Gm8170-201ENSMUST00000218581 945 ntBASIC12.63□□□□□ -0.39
Pde6aP27664 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6aP27664 Gm8181-201ENSMUST00000062242 669 ntBASIC12.63□□□□□ -0.39
Pde6aP27664 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6aP27664 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6aP27664 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC12.63□□□□□ -0.39
Pde6aP27664 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6aP27664 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC12.63□□□□□ -0.39
Pde6aP27664 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.63□□□□□ -0.39
Pde6aP27664 Gm21142-201ENSMUST00000179999 2604 ntBASIC12.63□□□□□ -0.39
Pde6aP27664 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6aP27664 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6aP27664 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6aP27664 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6aP27664 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6aP27664 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Pde6aP27664 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6aP27664 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pde6aP27664 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.62□□□□□ -0.39
Pde6aP27664 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pde6aP27664 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pde6aP27664 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Pde6aP27664 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Gm16518-201ENSMUST00000117960 508 ntBASIC12.62□□□□□ -0.39
Pde6aP27664 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.62□□□□□ -0.39
Pde6aP27664 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pde6aP27664 Gm8723-201ENSMUST00000166076 820 ntBASIC12.62□□□□□ -0.39
Pde6aP27664 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Gm8701-201ENSMUST00000169259 874 ntBASIC12.62□□□□□ -0.39
Pde6aP27664 Gm7985-201ENSMUST00000183329 981 ntBASIC12.62□□□□□ -0.39
Pde6aP27664 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Gm31274-201ENSMUST00000197356 229 ntBASIC12.62□□□□□ -0.39
Pde6aP27664 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Gm19091-201ENSMUST00000208120 978 ntBASIC12.62□□□□□ -0.39
Pde6aP27664 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pde6aP27664 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Gm42833-201ENSMUST00000196019 2124 ntBASIC12.62□□□□□ -0.39
Pde6aP27664 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Gm37697-201ENSMUST00000195680 1844 ntBASIC12.62□□□□□ -0.39
Pde6aP27664 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pde6aP27664 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pde6aP27664 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pde6aP27664 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
Pde6aP27664 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC12.61□□□□□ -0.39
Pde6aP27664 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pde6aP27664 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pde6aP27664 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pde6aP27664 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pde6aP27664 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pde6aP27664 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC12.61□□□□□ -0.39
Pde6aP27664 AC154528.2-201ENSMUST00000228432 3023 ntBASIC12.61□□□□□ -0.39
Pde6aP27664 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pde6aP27664 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 Gm6158-201ENSMUST00000109467 904 ntBASIC12.61□□□□□ -0.39
Pde6aP27664 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pde6aP27664 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.61□□□□□ -0.39
Pde6aP27664 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms